Protein–RNA interactions for Protein: A6NCW7

USP17L4, Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L4A6NCW7 RNU6-928P-201ENST00000516876 104 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC233702.9-201ENST00000581528 203 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AL110115.1-201ENST00000614396 364 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC110491.1-201ENST00000562191 2010 ntBASIC4.75□□□□□ -1.65
USP17L4A6NCW7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
USP17L4A6NCW7 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 CUL1P1-201ENST00000509510 2425 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 RNU6-626P-201ENST00000363354 107 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 RNU6-525P-201ENST00000363685 104 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 SNORA9-201ENST00000384215 133 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 RNU6-1145P-201ENST00000384246 107 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 MIR34B-201ENST00000385076 84 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 AC099548.1-201ENST00000421443 426 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 HLA-N-201ENST00000437516 135 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 RPS29P20-201ENST00000489592 171 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 AC110768.1-201ENST00000509222 400 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 SNORA40.9-201ENST00000515895 93 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 RNU6-581P-201ENST00000516214 105 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 RNU2-58P-201ENST00000516403 183 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 RNA5SP54-201ENST00000516951 92 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.74□□□□□ -1.65
USP17L4A6NCW7 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
USP17L4A6NCW7 AC073073.2-201ENST00000609827 2578 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 RNU6-740P-201ENST00000364734 105 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 RNU6-487P-201ENST00000365430 104 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 RNU6-20P-201ENST00000384106 107 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 SNORA36A-201ENST00000384221 132 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 Y_RNA.590-201ENST00000410140 107 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 Y_RNA.626-201ENST00000411288 95 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 RPS26P42-201ENST00000413485 326 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AL035423.1-201ENST00000420331 213 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 Y_RNA.679-201ENST00000516416 91 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AC021739.1-201ENST00000559631 174 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AC096577.2-201ENST00000611455 153 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 MIR7154-201ENST00000620673 73 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 IGHVIII-44-202ENST00000636235 289 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AC068254.2-201ENST00000623938 3577 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 AC027290.2-201ENST00000623210 18662 ntBASIC4.73□□□□□ -1.65
USP17L4A6NCW7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USP17L4A6NCW7 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 RNU1-35P-201ENST00000362782 153 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 Y_RNA.275-201ENST00000364726 110 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 MIR487A-201ENST00000385009 80 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 SNORA46.1-201ENST00000391069 153 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 SNORA26.3-201ENST00000391119 136 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 RNA5SP390-201ENST00000410191 113 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 BPY2DP-201ENST00000422208 265 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 AL139247.1-201ENST00000422768 325 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 MTCO1P5-201ENST00000433573 344 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 RPL39P29-201ENST00000447779 157 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 snoU13.6-201ENST00000458785 104 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 AL391261.3-201ENST00000557194 520 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 AC091953.5-201ENST00000622919 233 ntBASIC4.72□□□□□ -1.65
USP17L4A6NCW7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
USP17L4A6NCW7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.71□□□□□ -1.65
USP17L4A6NCW7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms