Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC126177.8-201ENST00000618339 1015 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AL160413.1-201ENST00000622780 310 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC090617.7-201ENST00000623952 126 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 MIR3529-201ENST00000637713 78 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 AC010889.1-201ENST00000566193 2666 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.88□□□□□ -1.95
TCRBV7S3A2A0A539 KPNA2P1-201ENST00000458289 1591 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 RNU1-105P-201ENST00000363470 161 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 SNORA38.1-201ENST00000364172 131 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-1317P-201ENST00000364582 104 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 SNORD116-20-201ENST00000384529 92 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-306P-201ENST00000384617 107 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 MIR34B-201ENST00000385076 84 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 RNU2-49P-201ENST00000410666 184 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 USP9YP30-201ENST00000430729 455 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AL358232.1-201ENST00000448030 501 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 ELOCP24-201ENST00000456370 334 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 U8.21-201ENST00000459536 136 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC114801.2-201ENST00000503825 781 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC108043.1-201ENST00000512696 574 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 SNORA31.23-201ENST00000517219 133 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC010653.1-201ENST00000571108 881 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC012493.2-201ENST00000595083 291 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AC011494.1-201ENST00000596454 237 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 AL391813.1-201ENST00000603098 260 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 MIR3651-201ENST00000630427 90 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 MTND4LP32-201ENST00000636111 270 ntBASIC2.87□□□□□ -1.95
TCRBV7S3A2A0A539 MAPK10-266ENST00000641066 6555 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 U8.8-201ENST00000365399 135 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-748P-201ENST00000384648 107 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 SNORA48.5-201ENST00000391143 135 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 SNORA75.4-201ENST00000391278 119 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 AL513475.1-201ENST00000406602 315 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 SNORD88.1-201ENST00000408684 91 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.594-201ENST00000410373 140 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 PTGES3P4-201ENST00000426243 356 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 AL591043.1-201ENST00000432461 424 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 AC007969.2-201ENST00000441891 191 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 FTH1P25-201ENST00000447665 469 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 RPS29P27-201ENST00000463711 170 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 RN7SL297P-201ENST00000483161 293 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 RPL23AP49-201ENST00000492925 468 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 SCGB1D5P-201ENST00000515134 247 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 Y_RNA.670-201ENST00000516255 105 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 RNU5B-3P-201ENST00000516601 115 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-612P-201ENST00000516909 102 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 SNORA31.18-201ENST00000517043 134 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 MIR1254-2-201ENST00000579553 63 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 AC018889.1-201ENST00000605372 397 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 MIR8076-201ENST00000611401 83 ntBASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.86□□□□□ -1.95
TCRBV7S3A2A0A539 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 MIR422A-201ENST00000362286 90 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-527P-201ENST00000363425 104 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-842P-201ENST00000384269 107 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-933P-201ENST00000384424 107 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-19P-201ENST00000384718 107 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-174P-201ENST00000410406 106 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 RNA5SP344-201ENST00000411081 104 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 MTND1P14-201ENST00000427400 950 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC243964.1-201ENST00000441814 261 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC124916.1-201ENST00000444020 547 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 NDUFAF4P3-201ENST00000456468 525 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 RPL7P49-201ENST00000471402 708 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AP001025.1-201ENST00000486139 332 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC097462.2-201ENST00000504623 481 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AP005902.1-201ENST00000521358 186 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC044792.1-201ENST00000593294 196 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC078795.3-201ENST00000602913 472 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AL627309.6-201ENST00000606857 840 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 RNU6-91P-201ENST00000607774 107 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC009229.3-201ENST00000608056 282 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AC084781.2-201ENST00000615568 161 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 AL669831.3-213ENST00000636676 183 ntBASIC2.85□□□□□ -1.95
TCRBV7S3A2A0A539 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms