Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 RNU7-175P-201ENST00000515915 61 ntBASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 RNU7-4P-201ENST00000516961 62 ntBASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 AC144568.1-201ENST00000520139 137 ntBASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 AC060766.3-201ENST00000591442 263 ntBASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 YPEL5P2-201ENST00000605553 359 ntBASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 AL591424.2-201ENST00000617023 128 ntBASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 AL162373.1-201ENST00000620433 407 ntBASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 AP003122.5-201ENST00000527668 3766 ntBASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CCDC163A0A0D9SF12 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 Y_RNA.145-201ENST00000363527 102 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 RNU1-115P-201ENST00000365329 160 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 Y_RNA.389-201ENST00000383924 113 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 Y_RNA.424-201ENST00000384063 103 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 RNU6-748P-201ENST00000384648 107 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AC096649.2-201ENST00000416186 393 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 EIF1AXP1-201ENST00000419267 435 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 Z82188.1-201ENST00000436709 154 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AC004383.1-201ENST00000438135 289 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 TOMM22P6-201ENST00000465035 409 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 RPS27P26-201ENST00000494583 239 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 PPBPP1-201ENST00000510807 373 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 RNU4-77P-201ENST00000516692 156 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 MIR4680-201ENST00000580906 66 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AL162730.1-201ENST00000605734 292 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 SCARNA15.3-201ENST00000626315 122 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 SCARNA4.1-201ENST00000628597 123 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AL773545.4-201ENST00000637262 310 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AL513478.4-201ENST00000641636 310 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 AL035425.3-201ENST00000564206 4996 ntBASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.7□□□□□ -1.82
CCDC163A0A0D9SF12 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 RNU6-212P-201ENST00000362642 104 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 SNORD32A-201ENST00000364805 84 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 RNU6-1222P-201ENST00000384615 107 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 Z98941.1-201ENST00000407764 100 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 RNA5SP390-201ENST00000410191 113 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 RNA5SP39-201ENST00000411245 120 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 AC005326.1-201ENST00000429197 123 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 RPS4XP22-201ENST00000480755 780 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 Y_RNA.706-201ENST00000516933 99 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 Y_RNA.720-201ENST00000517166 92 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 CYP4A43P-201ENST00000568156 121 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 AC090897.2-201ENST00000581715 130 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 MIR7154-201ENST00000620673 73 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 MIR8057-201ENST00000620957 69 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 AL606534.2-204ENST00000635008 178 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 AP000553.6-201ENST00000641242 118 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 ZNF826P-207ENST00000622273 1910 ntBASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CCDC163A0A0D9SF12 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AC008669.1-201ENST00000565823 2178 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 HAUS6P2-201ENST00000433254 2404 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 SNORA38.1-201ENST00000364172 131 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 MIR513A2-201ENST00000385249 127 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 SNORA69.1-201ENST00000390904 137 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 SNORA12.2-201ENST00000391040 156 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AL365496.1-201ENST00000426885 215 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AC244670.1-201ENST00000436879 112 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AC008155.2-201ENST00000464337 397 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 RPL30P1-201ENST00000488676 339 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 RPL23AP75-201ENST00000491601 451 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 SNORA25.11-201ENST00000515935 105 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 RNU2-27P-201ENST00000516185 142 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 RNU5B-3P-201ENST00000516601 115 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 GNAI2P1-201ENST00000541815 315 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 AC006600.1-201ENST00000572529 153 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 MIR5701-3-201ENST00000578890 82 ntBASIC3.68□□□□□ -1.82
CCDC163A0A0D9SF12 MIR5701-1-201ENST00000585138 82 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms