Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 MIR19B1-201ENST00000384829 87 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 CBX3P9-201ENST00000402326 552 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AC130509.1-201ENST00000464158 433 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AC104629.1-201ENST00000494226 508 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-496P-201ENST00000516145 99 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-1092P-201ENST00000516955 87 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 CYCSP23-201ENST00000519781 313 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AC100821.1-201ENST00000523153 2479 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 SNRPGP1-201ENST00000553864 222 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AC008088.1-201ENST00000580993 280 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 MTCO2P2-201ENST00000591258 225 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AP001981.2-201ENST00000603241 418 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AC112220.3-201ENST00000605502 502 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AL022345.2-201ENST00000606307 135 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AL157770.1-201ENST00000623049 439 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AC099654.9-201ENST00000637055 678 ntBASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
TRAV17A0A0B4J275 AC092447.10-201ENST00000620607 1652 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-487P-201ENST00000365430 104 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-843P-201ENST00000384454 104 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 MIR194-1-201ENST00000384892 85 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 RNU2-64P-201ENST00000411315 191 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AC009518.2-201ENST00000418056 731 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AC005534.2-201ENST00000431047 433 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 FTH1P12-201ENST00000432137 551 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 RNU7-136P-201ENST00000458819 69 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 snoU13.14-201ENST00000459372 104 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AC145146.1-201ENST00000496370 254 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 PSMC1P5-201ENST00000512850 177 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-390P-201ENST00000516259 103 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AC004817.2-201ENST00000561794 651 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 MIR1273G-201ENST00000577677 100 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AL021879.1-201ENST00000611756 288 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 AC018926.1-201ENST00000616335 435 ntBASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
TRAV17A0A0B4J275 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 MIR92A1-201ENST00000385233 78 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 MIR548B-201ENST00000385247 97 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AL359634.1-202ENST00000404721 284 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 RNA5SP193-201ENST00000410353 107 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AL591043.1-201ENST00000432461 424 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 HSPE1P9-201ENST00000440046 311 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 BTF3P15-201ENST00000455606 336 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 RNU1-131P-201ENST00000458943 161 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 MED28P2-201ENST00000475771 317 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-322P-201ENST00000516010 103 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-229P-201ENST00000516614 102 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-572P-201ENST00000516724 80 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 SNORA76.2-201ENST00000517095 137 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AL138955.1-201ENST00000622881 1040 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AC008133.2-201ENST00000624540 351 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 AC004808.1-201ENST00000627671 721 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 OR4G3P-201ENST00000633500 913 ntBASIC0.49□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-655P-201ENST00000362858 107 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 RNA5SP325-201ENST00000363756 130 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-1210P-201ENST00000363775 107 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-622P-201ENST00000384272 103 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-1065P-201ENST00000384513 106 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 USP9YP33-201ENST00000412220 421 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC114482.1-201ENST00000418010 247 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC104651.1-201ENST00000427559 735 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC098934.3-201ENST00000430450 190 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC007395.1-201ENST00000451333 677 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AL353752.1-201ENST00000454946 260 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 RNU6-333P-201ENST00000459117 107 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 HIGD1AP17-201ENST00000554576 276 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 KATNBL1P5-201ENST00000605015 517 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC100814.1-201ENST00000606963 623 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC005332.6-201ENST00000613178 446 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC016911.1-201ENST00000613297 452 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 AC040896.1-201ENST00000613819 479 ntBASIC0.48□□□□□ -2.33
TRAV17A0A0B4J275 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.48□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms