Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AP002802.2-201ENST00000605877 235 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC095038.3-201ENST00000634439 195 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AL391516.1-201ENST00000554380 2449 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 Y_RNA.332-201ENST00000365271 113 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 RNU2-7P-201ENST00000410794 178 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 Y_RNA.623-201ENST00000411128 95 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 PIGPP2-201ENST00000411569 458 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 MTND4P3-201ENST00000417829 541 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 MTCYBP5-201ENST00000423752 1135 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 AC093899.1-201ENST00000457984 376 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 SNORD116-28-201ENST00000516123 91 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 RNA5SP458-201ENST00000516188 119 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 RNU6-1092P-201ENST00000516955 87 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 RNA5SP490-201ENST00000517141 136 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 RNU6-1028P-201ENST00000517164 93 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 AP000907.2-201ENST00000530827 353 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 SNORD114-21-201ENST00000606412 72 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 AC009033.1-201ENST00000624279 431 ntBASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
TRAV4A0A0B4J268 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 RN7SKP266-201ENST00000410232 287 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 RPS15AP12-201ENST00000419498 388 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 SNX2P2-201ENST00000424553 323 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AL627311.1-201ENST00000431514 115 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC092473.1-201ENST00000441098 221 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC006026.2-201ENST00000457376 180 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC134050.1-201ENST00000495088 933 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 MTND2P33-201ENST00000506452 1031 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC113347.3-201ENST00000509113 148 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 RNA5SP481-201ENST00000516814 122 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC015688.6-201ENST00000577737 104 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AP003465.2-201ENST00000602571 373 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AL391001.1-201ENST00000602747 715 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC174048.1-201ENST00000603389 144 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC090578.1-201ENST00000604955 591 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AL159153.1-201ENST00000619688 317 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 AC068880.4-201ENST00000623082 495 ntBASIC0.72□□□□□ -2.29
TRAV4A0A0B4J268 MIR412-201ENST00000362142 91 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 RNU4-38P-201ENST00000364472 129 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 RNU6-224P-201ENST00000384055 107 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 FGF7P8-201ENST00000402994 292 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 AL022238.1-201ENST00000442557 355 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 RNU5A-4P-201ENST00000516588 111 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 SUMO2P18-201ENST00000518873 252 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 AC087894.1-201ENST00000538359 518 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 AL512310.8-201ENST00000550183 120 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 MIR4661-201ENST00000582720 75 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 BNIP3P26-201ENST00000600827 554 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 MZT1P2-201ENST00000604387 248 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 BX284668.6-201ENST00000606899 438 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 AC130324.3-201ENST00000614165 542 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 FRG1KP-201ENST00000623592 341 ntBASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TRAV4A0A0B4J268 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 Y_RNA.327-201ENST00000365201 102 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 SNORA75B-201ENST00000384053 137 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 SNORA25-201ENST00000384384 134 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 SNORA40.2-201ENST00000390847 128 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 USP9YP33-201ENST00000412220 421 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 USP9YP21-201ENST00000420603 432 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 TXNL1P1-201ENST00000429528 554 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 LARP1BP3-201ENST00000437229 869 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 CALM1P1-201ENST00000442082 433 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 PRPS1P1-201ENST00000445305 876 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 FTH1P25-201ENST00000447665 469 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 HSPE1P13-201ENST00000451143 297 ntBASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.7□□□□□ -2.3
TRAV4A0A0B4J268 AL022345.2-201ENST00000606307 135 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms