Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 WISP1-OT1-201ENST00000602893 642 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AL138889.2-201ENST00000603883 242 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AL158050.2-201ENST00000605336 568 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 AL353770.2-201ENST00000620024 78 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 FRG1KP-201ENST00000623592 341 ntBASIC1.01□□□□□ -2.25
TRAV41A0A0B4J266 RNY4P24-201ENST00000362735 96 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 MIR578-201ENST00000384828 96 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 SNORA40.6-201ENST00000391153 128 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 Y_RNA.595-201ENST00000410403 105 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AC004965.1-201ENST00000413033 213 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 TRAPPC2P8-201ENST00000440676 396 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 TRAPPC2P3-201ENST00000443200 321 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 snoU109.3-201ENST00000459477 145 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AC091951.3-201ENST00000504093 246 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AC093259.1-201ENST00000509755 300 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 ZNF519P3-201ENST00000557158 1032 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AP001485.1-201ENST00000604799 199 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AP002360.4-201ENST00000606980 481 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 snoU13.31-201ENST00000607291 104 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 AL159153.1-201ENST00000619688 317 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 OR4G3P-201ENST00000633500 913 ntBASIC1□□□□□ -2.25
TRAV41A0A0B4J266 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1□□□□□ -2.25
TRAV41A0A0B4J266 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-809P-201ENST00000384461 107 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-1176P-201ENST00000390955 107 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 RPS15AP12-201ENST00000419498 388 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 MTCO2P21-201ENST00000419780 677 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 MTCYBP5-201ENST00000423752 1135 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 CALM2P2-201ENST00000428512 440 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 RPS15AP10-201ENST00000432472 382 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 MTND1P32-201ENST00000433043 938 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 snoU13.9-201ENST00000458927 103 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 RPL36AP21-201ENST00000490372 323 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC098862.1-201ENST00000504991 413 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 MTCYBP40-201ENST00000509390 1135 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC009646.1-201ENST00000510455 318 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC025465.3-201ENST00000510570 311 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC108729.3-201ENST00000513484 108 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 RNU2-10P-201ENST00000516375 211 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 SNORA43.2-201ENST00000516652 128 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 BNIP3P6-201ENST00000549284 499 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 MIR3660-201ENST00000584845 100 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC023043.2-201ENST00000589678 1026 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC112187.2-201ENST00000604345 283 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC063943.3-201ENST00000615562 356 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AL607023.1-201ENST00000620045 248 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 AC022513.1-201ENST00000624512 117 ntBASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.99□□□□□ -2.25
TRAV41A0A0B4J266 MIR26B-201ENST00000362251 77 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RNU4-1-201ENST00000363925 141 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-660P-201ENST00000364566 109 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-906P-201ENST00000384700 70 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RPS3AP36-201ENST00000398190 775 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 Y_RNA.597-201ENST00000410463 100 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AC114491.1-201ENST00000416095 246 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AL121601.2-201ENST00000438019 707 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 MTCO1P44-201ENST00000441935 243 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AL360271.2-201ENST00000447710 161 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AC012308.1-201ENST00000451232 178 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 MTND1P12-201ENST00000455231 147 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 SNRPFP4-201ENST00000456366 242 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RPL30P12-201ENST00000474666 353 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AC010409.1-201ENST00000487382 476 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 MTCO3P9-201ENST00000506989 781 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 AC116347.2-201ENST00000514912 523 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RNU1-86P-201ENST00000516108 154 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RNU1-107P-201ENST00000516617 154 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RNA5SP337-201ENST00000517007 109 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 RNU6-902P-201ENST00000517212 91 ntBASIC0.98□□□□□ -2.25
TRAV41A0A0B4J266 IGLVVI-22-1-201ENST00000521183 211 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms