Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.3□□□□□ -2.2
TRAV8-4A0A0B4J246 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 RNU6-527P-201ENST00000363425 104 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 SNORD114-6-201ENST00000364393 72 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 RNU4-28P-201ENST00000364739 141 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 RNA5SP363-201ENST00000365072 115 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 XGY1-201ENST00000381172 446 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 SNORA20.2-201ENST00000383922 131 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 RNU6-1222P-201ENST00000384615 107 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 RPL17P50-201ENST00000396131 546 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 SNORA3.2-201ENST00000408221 125 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 RNU6-387P-201ENST00000411331 105 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 UBE2DNL-203ENST00000474922 222 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC116562.3-201ENST00000506136 177 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC104806.1-201ENST00000508720 308 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 FAM206BP-201ENST00000510179 541 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC008549.1-201ENST00000512900 643 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 MIR449C-201ENST00000516047 92 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 RNA5SP182-201ENST00000516064 82 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 SNORA44.1-201ENST00000517031 108 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 MTND2P32-201ENST00000521584 1038 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC068587.5-201ENST00000528506 175 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AP005435.4-201ENST00000529514 284 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC002400.1-201ENST00000569310 726 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 MIR4648-201ENST00000580107 72 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC245884.10-201ENST00000597355 337 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AP000654.2-201ENST00000605633 586 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC025754.2-201ENST00000606491 432 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC116312.1-201ENST00000606841 314 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 AC091304.9-201ENST00000612091 226 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 Z69720.2-201ENST00000624755 279 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 U4.7-201ENST00000638126 106 ntBASIC1.29□□□□□ -2.2
TRAV8-4A0A0B4J246 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 RNU6-1285P-201ENST00000363480 105 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 RNY1P12-201ENST00000364251 105 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 SNORD32B-201ENST00000364460 84 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 SNORA12-201ENST00000391162 147 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AL023284.1-201ENST00000403956 276 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 MIR1294-201ENST00000408503 142 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AL593851.1-201ENST00000426171 157 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC104850.1-201ENST00000435940 476 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 TAF9P1-201ENST00000445421 515 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 TAF9P2-201ENST00000454958 515 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC010409.1-201ENST00000487382 476 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 RPL38P4-201ENST00000502376 214 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC021146.2-201ENST00000504736 556 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC119751.5-201ENST00000514077 770 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AF131215.7-201ENST00000602443 707 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC018889.1-201ENST00000605372 397 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 AC130454.1-201ENST00000622948 401 ntBASIC1.28□□□□□ -2.2
TRAV8-4A0A0B4J246 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 RNU6-661P-201ENST00000362409 107 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 RNU4-15P-201ENST00000362613 141 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 U8.2-201ENST00000363156 134 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 RNU6-105P-201ENST00000363909 104 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 SNORD115-7-201ENST00000365306 82 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 RNU6-169P-201ENST00000365336 107 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 RNU6-116P-201ENST00000384042 109 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 AL357139.1-201ENST00000407792 426 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 RNU2-8P-201ENST00000410727 190 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 OR6C66P-201ENST00000414917 930 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 HMGB1P18-201ENST00000438801 619 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 MTND2P4-201ENST00000445034 1004 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 RNU6-333P-201ENST00000459117 107 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 AC005908.1-201ENST00000468701 347 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 SNORA31.17-201ENST00000516953 127 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 RNU2-46P-201ENST00000517038 113 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 TRAV32-201ENST00000553993 340 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 SUB1P4-201ENST00000566062 339 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 AC009977.1-201ENST00000586015 570 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 AC022513.1-201ENST00000624512 117 ntBASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
TRAV8-4A0A0B4J246 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms