Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 AL136363.2-201ENST00000604173 851 ntBASIC0.67□□□□□ -2.3
TRAV12-1A0A0B4J245 AC090578.1-201ENST00000604955 591 ntBASIC0.67□□□□□ -2.3
TRAV12-1A0A0B4J245 AC112220.3-201ENST00000605502 502 ntBASIC0.67□□□□□ -2.3
TRAV12-1A0A0B4J245 AC108747.1-201ENST00000609508 535 ntBASIC0.67□□□□□ -2.3
TRAV12-1A0A0B4J245 AL392048.1-201ENST00000613946 534 ntBASIC0.67□□□□□ -2.3
TRAV12-1A0A0B4J245 uc_338.12-201ENST00000616344 181 ntBASIC0.67□□□□□ -2.3
TRAV12-1A0A0B4J245 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 RNU6-960P-201ENST00000364056 120 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 SNORD32B-201ENST00000364460 84 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 SNORA70.7-201ENST00000384159 133 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 MIR520A-201ENST00000384862 85 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 EBAG9P1-201ENST00000418955 543 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 EIF1P1-201ENST00000421436 341 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 CST2P1-201ENST00000425770 87 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 FTH1P12-201ENST00000432137 551 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 RPL23AP30-201ENST00000432419 501 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 FTH1P25-201ENST00000447665 469 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 RNA5SP437-201ENST00000517249 129 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AC023050.2-201ENST00000544968 387 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 UBE2Q2P8-201ENST00000560644 102 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 MTND4LP25-201ENST00000570218 163 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AL353778.1-201ENST00000603149 408 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AC013244.2-201ENST00000603396 103 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 BNIP3P31-201ENST00000604515 566 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 AC004492.1-201ENST00000607036 742 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 U6.42-201ENST00000618440 107 ntBASIC0.66□□□□□ -2.3
TRAV12-1A0A0B4J245 MIR340-201ENST00000362125 95 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-384P-201ENST00000364900 104 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 SNORA12-201ENST00000391162 147 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 UBE2V1P2-201ENST00000397758 440 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC069282.1-201ENST00000411911 526 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AL161935.2-201ENST00000414627 60 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC123900.1-201ENST00000420390 96 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 MTND1P30-201ENST00000441241 901 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC093852.1-201ENST00000503587 266 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC010587.2-201ENST00000511727 448 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU5F-2P-201ENST00000516066 82 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC068587.4-201ENST00000533893 186 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 DEFB131E-202ENST00000602581 683 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 AC009033.1-201ENST00000624279 431 ntBASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.65□□□□□ -2.31
TRAV12-1A0A0B4J245 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 MTND5P35-201ENST00000557537 1720 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 Y_RNA.46-201ENST00000362695 102 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-433P-201ENST00000363216 104 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 SNORD114-2-201ENST00000363953 78 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 Y_RNA.255-201ENST00000364581 97 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 Y_RNA.465-201ENST00000384293 102 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-1065P-201ENST00000384513 106 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU6-1179P-201ENST00000384667 107 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 RN7SKP61-201ENST00000410642 295 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU2-7P-201ENST00000410794 178 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 RNU2-72P-201ENST00000411175 163 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 TOMM20P4-201ENST00000427861 435 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AC007969.2-201ENST00000441891 191 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AC134050.1-201ENST00000495088 933 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 MTCO3P9-201ENST00000506989 781 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AC005741.1-201ENST00000511094 432 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 SNORA19.3-201ENST00000516165 130 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 SUMO2P18-201ENST00000518873 252 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR548AC-201ENST00000585049 88 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AL158211.2-201ENST00000607282 395 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 PART1_2.1-201ENST00000612397 250 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR8065-201ENST00000620577 100 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 OR4G3P-201ENST00000633500 913 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 AC099654.5-201ENST00000636479 350 ntBASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV12-1A0A0B4J245 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 AC010615.1-201ENST00000594254 1764 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 SNORA4.1-201ENST00000364263 144 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 SNORD116.1-201ENST00000365628 92 ntBASIC0.63□□□□□ -2.31
TRAV12-1A0A0B4J245 MIR578-201ENST00000384828 96 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms