Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 Y_RNA.332-201ENST00000365271 113 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-487P-201ENST00000365430 104 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 UBE2V1P10-201ENST00000414685 269 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 snoU13.14-201ENST00000459372 104 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 MTCO3P42-201ENST00000509488 518 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AC108078.2-201ENST00000510750 236 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 MTCO3P39-201ENST00000514812 518 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 SNORA31.2-201ENST00000516019 134 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-1261P-201ENST00000517194 104 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AP001893.2-201ENST00000526949 202 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AC104229.1-201ENST00000561364 255 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 BNIP3P30-201ENST00000601184 574 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AC069114.2-201ENST00000604699 304 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AL451064.1-201ENST00000607718 471 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AL158163.2-201ENST00000619110 700 ntBASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.19□□□□□ -2.38
TRAV13-2A0A0B4J235 AC245060.5-201ENST00000610778 3293 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 snoU2_19.1-201ENST00000362361 80 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-343P-201ENST00000364709 104 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-1176P-201ENST00000390955 107 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 MIR942-201ENST00000401111 86 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AL357139.1-201ENST00000407792 426 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 RAB28P5-201ENST00000427490 651 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AL008629.1-201ENST00000438615 184 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 snoU13.30-201ENST00000458951 104 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 snoU13.27-201ENST00000459278 104 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AC034244.1-201ENST00000507687 207 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AC079140.3-201ENST00000511111 550 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 SNORD79.1-201ENST00000516069 84 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 RNA5SP134-201ENST00000516492 96 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 KATNBL1P5-201ENST00000605015 517 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-87P-201ENST00000607561 108 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 MIR6767-201ENST00000637302 66 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 AL442644.1-201ENST00000454390 3105 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 MTND4P14-201ENST00000435799 1354 ntBASIC0.18□□□□□ -2.38
TRAV13-2A0A0B4J235 RNY1P10-201ENST00000363268 113 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 RNA5SP499-201ENST00000363982 119 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-353P-201ENST00000364266 108 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 ZNF736P10Y-201ENST00000403990 1110 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 RPS15AP10-201ENST00000432472 382 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 MTCO3P18-201ENST00000440206 761 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 MTND1P30-201ENST00000441241 901 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 AL078601.1-201ENST00000444542 271 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 MTCO3P7-201ENST00000510008 774 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 AC009646.1-201ENST00000510455 318 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 SNORA31.3-201ENST00000516029 96 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 SNORD60.2-201ENST00000516883 86 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 SUMO2P18-201ENST00000518873 252 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 AC092451.2-201ENST00000538746 658 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 AC006518.2-201ENST00000542513 940 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 MIR4524B-201ENST00000581569 115 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 MIR5093-201ENST00000583199 100 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 AP000654.2-201ENST00000605633 586 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 AC063943.3-201ENST00000615562 356 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 AL357080.1-201ENST00000617394 239 ntBASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.17□□□□□ -2.38
TRAV13-2A0A0B4J235 Y_RNA.25-201ENST00000362528 102 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-1019P-201ENST00000364424 107 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RNA5SP259-201ENST00000365541 109 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-622P-201ENST00000384272 103 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-1207P-201ENST00000384343 107 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-1235P-201ENST00000384559 107 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 MTCO1P56-201ENST00000401674 224 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU2-23P-201ENST00000410545 195 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 MTCO2P12-201ENST00000427426 682 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RNU6-498P-201ENST00000459468 107 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RPS26P45-201ENST00000471748 340 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC114981.1-201ENST00000503897 678 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 TRAPPC2P7-201ENST00000509650 231 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC108729.3-201ENST00000513484 108 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 SNORA31.19-201ENST00000517079 126 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 RNA5SP490-201ENST00000517141 136 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AL442163.3-201ENST00000554110 156 ntBASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.16□□□□□ -2.38
TRAV13-2A0A0B4J235 AC093913.1-201ENST00000614178 329 ntBASIC0.16□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms