Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 AC018889.1-201ENST00000605372 397 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 HMGB1P24-202ENST00000615653 685 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC006386.2-201ENST00000624491 75 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC012005.1-201ENST00000624575 75 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC010680.1-201ENST00000590024 3590 ntBASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.19□□□□□ -1.9
CCDC187A0A096LP49 AC073073.2-201ENST00000609827 2578 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 RNU6-593P-201ENST00000364716 112 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 RNU6-1329P-201ENST00000365664 107 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.455-201ENST00000384230 98 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 RNU6-198P-201ENST00000384258 104 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 SNORA75.6-201ENST00000391318 127 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AL138885.1-201ENST00000405921 675 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AC096644.2-201ENST00000429278 159 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 GSTA11P-201ENST00000452866 669 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AC006445.1-201ENST00000491925 405 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 RPS27AP10-201ENST00000496103 208 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AC096745.1-201ENST00000509945 370 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 IGHV3-76-201ENST00000522465 295 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AP002404.1-201ENST00000532005 451 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 NACAP3-201ENST00000552100 481 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AL391261.3-201ENST00000557194 520 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AC123912.5-201ENST00000605470 343 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 AC099778.2-201ENST00000610904 211 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
CCDC187A0A096LP49 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-37P-201ENST00000362692 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-11P-201ENST00000364234 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.257-201ENST00000364596 102 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-7-201ENST00000364784 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-283P-201ENST00000364788 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.307-201ENST00000365022 117 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU1-140P-201ENST00000365040 165 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-8-201ENST00000365467 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 Z98749.2-208ENST00000381646 500 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-25P-201ENST00000383873 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-1-201ENST00000383898 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.404-201ENST00000383978 102 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-48P-201ENST00000384161 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-36P-201ENST00000384172 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-4P-201ENST00000384205 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-5P-201ENST00000384238 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-3P-201ENST00000384314 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-16P-201ENST00000384385 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.510-201ENST00000384511 114 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-15P-201ENST00000384534 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-2-201ENST00000384627 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-29P-201ENST00000384637 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-9-201ENST00000384776 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-33P-201ENST00000384793 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AL391417.1-201ENST00000404100 426 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNA5SP31-201ENST00000411144 127 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AC008267.5-201ENST00000424928 265 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AL645568.3-201ENST00000433683 316 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 UBE2DNL-203ENST00000474922 222 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 MRPS35P2-201ENST00000508242 191 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AC092436.3-201ENST00000511788 257 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-635P-201ENST00000516651 102 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-1016P-201ENST00000516689 94 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AC026333.2-201ENST00000542164 106 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AC008121.1-201ENST00000603244 268 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 RNU6-6P-201ENST00000606623 107 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 AC133104.2-201ENST00000615272 193 ntBASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.17□□□□□ -1.9
CCDC187A0A096LP49 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 AC110774.1-201ENST00000623567 2018 ntBASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 RNU6-72P-201ENST00000384285 79 ntBASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 Y_RNA.556-201ENST00000384677 113 ntBASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 RNU6-95P-201ENST00000384697 107 ntBASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.16□□□□□ -1.9
CCDC187A0A096LP49 Z99755.1-201ENST00000414048 380 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms