Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 PAXBP1P1-201ENST00000449315 447 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 ZNF886P-201ENST00000450781 723 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AL583843.1-201ENST00000456070 346 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 RNA5SP269-201ENST00000459032 137 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 snoU109.2-201ENST00000459316 135 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 snoU13.14-201ENST00000459372 104 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 MTND1P16-201ENST00000465177 898 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC117454.1-201ENST00000491120 168 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC009646.1-201ENST00000510455 318 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AF131216.2-201ENST00000512316 564 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC112198.4-201ENST00000515450 351 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 OR8K2P-201ENST00000524645 927 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 DEFB130C-202ENST00000530001 230 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC087897.1-201ENST00000550134 156 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC008015.1-201ENST00000555505 465 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AP001542.1-201ENST00000591314 200 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC211469.2-201ENST00000605461 205 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC027335.2-201ENST00000624030 375 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC009033.1-201ENST00000624279 431 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 DDX43P2-201ENST00000604753 1354 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 AC018630.2-201ENST00000534866 2403 ntBASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
TRAV27A0A087WT01 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 RNY1P10-201ENST00000363268 113 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 RNU6-236P-201ENST00000363886 106 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 Y_RNA.255-201ENST00000364581 97 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 RNU1-36P-201ENST00000365130 165 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 Y_RNA.338-201ENST00000365320 114 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 SNORA75B-201ENST00000384053 137 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AL359704.1-201ENST00000411586 781 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AP000275.1-201ENST00000411943 390 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 C8orf59P1-201ENST00000429930 303 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AC245047.4-201ENST00000433189 144 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AL603825.1-201ENST00000438481 80 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 MTND1P3-201ENST00000484956 952 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AC097473.1-201ENST00000508142 408 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AL157871.3-201ENST00000557231 293 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 HMGB1P33-201ENST00000563485 527 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 MIR4661-201ENST00000582720 75 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AP003465.2-201ENST00000602571 373 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 AC008945.2-201ENST00000606056 604 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 MIR8065-201ENST00000620577 100 ntBASIC0.63□□□□□ -2.31
TRAV27A0A087WT01 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC009541.1-201ENST00000438279 2662 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 MIR337-201ENST00000362281 93 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 Y_RNA.33-201ENST00000362591 102 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AL161935.2-201ENST00000414627 60 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 UBE2D3P3-201ENST00000426992 425 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC004941.2-201ENST00000427009 228 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 CBX3P6-201ENST00000430257 527 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 RPL17P35-201ENST00000432217 549 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 RNU6-953P-201ENST00000459154 107 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 RNA5SP102-201ENST00000516865 106 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 RNA5SP437-201ENST00000517249 129 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 DEFB108E-201ENST00000524692 240 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 MTATP6P25-201ENST00000574491 261 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC015688.6-201ENST00000577737 104 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC022022.2-201ENST00000602989 360 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AL391646.1-201ENST00000603860 190 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC016727.1-205ENST00000605437 569 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC006270.3-201ENST00000605967 1036 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AL021879.1-201ENST00000611756 288 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 RMST_4.1-201ENST00000616886 107 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 AC099654.8-201ENST00000637757 681 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 LINC02555-201ENST00000563933 1951 ntBASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
TRAV27A0A087WT01 RNU5B-4P-201ENST00000363508 111 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 RNU6-1065P-201ENST00000384513 106 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 SNORD116-20-201ENST00000384529 92 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 RNU6-360P-201ENST00000390944 104 ntBASIC0.61□□□□□ -2.31
TRAV27A0A087WT01 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms