Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-103P-201ENST00000363686 107 ntBASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 Y_RNA.261-201ENST00000364631 102 ntBASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-578P-201ENST00000390980 103 ntBASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 DEFB131C-201ENST00000528817 165 ntBASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 MIR4744-201ENST00000581563 82 ntBASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 AC005255.1-201ENST00000593748 216 ntBASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 IPO5P1-202ENST00000600039 287 ntBASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHB11Q9Y5F2 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC139713.2-215ENST00000641428 5037 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-324P-201ENST00000363957 106 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-801P-201ENST00000364087 105 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-1279P-201ENST00000383917 103 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 U3.22-201ENST00000391120 215 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 RNA5SP397-201ENST00000391323 118 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 CYCSP48-201ENST00000417124 323 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 RPL30P13-201ENST00000418873 348 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AL732292.1-201ENST00000426692 226 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AL137159.1-201ENST00000452808 512 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC103975.1-201ENST00000482506 483 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AIG1P1-201ENST00000503376 148 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC005921.1-201ENST00000510589 286 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC015795.1-201ENST00000513669 327 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-928P-201ENST00000516876 104 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC136628.3-201ENST00000521868 290 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC011602.1-201ENST00000546484 331 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC024220.1-201ENST00000603675 484 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AL162713.1-201ENST00000604480 262 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 AC069294.1-201ENST00000608397 350 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 MFSD8-242ENST00000641690 4199 ntBASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.54□□□□□ -1.68
PCDHB11Q9Y5F2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 SCN1A-220ENST00000641603 12506 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 Y_RNA.127-201ENST00000363386 109 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-899P-201ENST00000363947 107 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 RNU6-454P-201ENST00000364292 107 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 RNA5SP189-201ENST00000364920 115 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 Y_RNA.415-201ENST00000384012 112 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 MIR195-201ENST00000385194 87 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 AL591419.1-201ENST00000427423 339 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 MTND4LP9-201ENST00000427694 174 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 AC114982.1-201ENST00000469402 321 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 AC107027.2-201ENST00000512197 115 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 AC021269.2-201ENST00000532318 330 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 POC1B-211ENST00000549504 581 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 DNAJC19P2-201ENST00000593340 302 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 AC013791.1-201ENST00000616619 62 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 AP005019.3-201ENST00000620418 560 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 CUL1P1-201ENST00000509510 2425 ntBASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PCDHB11Q9Y5F2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 RNU6-270P-201ENST00000364131 105 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 Y_RNA.218-201ENST00000364218 104 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 RNU4-11P-201ENST00000365287 132 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 RNU6-376P-201ENST00000384731 106 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 SNORA26.5-201ENST00000391215 123 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 MIR1193-201ENST00000408109 78 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 RNA5SP129-201ENST00000410276 118 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 HSPE1P12-201ENST00000412576 301 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AL135790.2-201ENST00000437701 267 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AC074290.1-201ENST00000448883 135 ntBASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PCDHB11Q9Y5F2 AC023141.12-201ENST00000512399 199 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms