Protein–RNA interactions for Protein: Q9Y5E6

PCDHB3, Protocadherin beta-3, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3Q9Y5E6 RNU6-412P-201ENST00000516434 106 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 MTND6P33-201ENST00000571794 183 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 MIR3136-201ENST00000583498 78 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 MIR4691-201ENST00000583764 85 ntBASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PCDHB3Q9Y5E6 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-766P-201ENST00000362478 107 ntBASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 AL590762.2-201ENST00000395798 571 ntBASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 EI24P2-201ENST00000397776 1076 ntBASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 AC099548.1-201ENST00000421443 426 ntBASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 COX6CP13-201ENST00000428703 226 ntBASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 SNORA70.12-201ENST00000516084 153 ntBASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 AC005868.1-201ENST00000536421 331 ntBASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 AL591926.8-201ENST00000616876 211 ntBASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PCDHB3Q9Y5E6 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AC000123.3-201ENST00000624029 4975 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 MTND5P18-201ENST00000445624 1801 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AC126323.6-202ENST00000568092 3511 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-508P-201ENST00000363231 103 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 Y_RNA.281-201ENST00000364774 94 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 SNORD18B-201ENST00000365659 72 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AC092017.2-201ENST00000427600 362 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 HMGN2P32-201ENST00000444648 269 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AL354714.3-201ENST00000447284 493 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 snoU13.4-201ENST00000458916 104 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AC006445.2-201ENST00000510061 472 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 RNU1-117P-201ENST00000517041 158 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AC008033.2-201ENST00000542626 177 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AC018630.3-201ENST00000542637 96 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AL451007.1-201ENST00000595491 289 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 RNA5SP108-201ENST00000605921 117 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.86□□□□□ -1.63
PCDHB3Q9Y5E6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-309P-201ENST00000364573 106 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-1107P-201ENST00000364817 104 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 RNA5SP173-201ENST00000364857 136 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 MIR192-201ENST00000384915 110 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 AC108022.1-201ENST00000493466 478 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 ENPP7P9-201ENST00000514456 627 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 RNU6-581P-201ENST00000516214 105 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 AC025281.1-201ENST00000567026 265 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 MIR3923-201ENST00000579521 83 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 MIR4270-201ENST00000581799 70 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 AP005432.2-201ENST00000608162 586 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 MIR8069-1-201ENST00000616627 86 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 MIR8069-2-201ENST00000621412 86 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 MIR1245B-201ENST00000636115 69 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 AC139713.2-214ENST00000642059 1811 ntBASIC4.85□□□□□ -1.63
PCDHB3Q9Y5E6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms