Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC009902.1-201ENST00000519351 183 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC104383.1-201ENST00000530297 370 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AL163153.1-201ENST00000554223 283 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC068792.1-201ENST00000621354 417 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC073308.1-201ENST00000623696 305 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC124864.2-201ENST00000624736 186 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.41-201ENST00000362646 102 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 SNORA7.1-201ENST00000363750 139 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 RNU6-641P-201ENST00000384006 107 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 RNU2-40P-201ENST00000410833 196 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AL591212.2-201ENST00000433923 257 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC092573.2-201ENST00000434546 243 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AL714022.1-201ENST00000439897 151 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC016691.1-201ENST00000441321 413 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AL078601.1-201ENST00000444542 271 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 RNU1-123P-201ENST00000458950 160 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 MRPS36P2-201ENST00000512569 299 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 RNU6-405P-201ENST00000516637 110 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 RNU6-914P-201ENST00000516749 109 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 SCARNA11.3-201ENST00000517276 130 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AP003392.2-201ENST00000527269 208 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 CR383656.8-201ENST00000549046 145 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 NACAP3-201ENST00000552100 481 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC012414.6-201ENST00000568241 401 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AL138889.2-201ENST00000603883 242 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AL645939.4-201ENST00000604495 135 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AP000860.1-201ENST00000605250 559 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC080013.6-201ENST00000606185 215 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC017083.3-201ENST00000609955 700 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AC005609.4-201ENST00000625071 447 ntBASIC1.52□□□□□ -2.17
SHANK1Q9Y566 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
SHANK1Q9Y566 AL391987.6-201ENST00000305671 199 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 RNU6-960P-201ENST00000364056 120 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 SNORA20.2-201ENST00000383922 131 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.481-201ENST00000384373 102 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 RNU6-748P-201ENST00000384648 107 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL451074.3-201ENST00000437709 472 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 MTCO2P7-201ENST00000446518 666 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 RNU6-953P-201ENST00000459154 107 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 MRPS17P3-201ENST00000465453 385 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC087441.2-201ENST00000529141 262 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 MIR4419B-201ENST00000577260 68 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 MIR3616-201ENST00000584070 92 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC008121.1-201ENST00000603244 268 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL136363.2-201ENST00000604173 851 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL161798.1-201ENST00000604630 131 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC130324.3-201ENST00000614165 542 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC072046.2-201ENST00000618366 268 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.255-201ENST00000364581 97 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 SNORA75B-201ENST00000384053 137 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 RNU4-46P-201ENST00000410818 138 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC003071.1-201ENST00000451219 789 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.51□□□□□ -2.17
SHANK1Q9Y566 TPT1P7-201ENST00000458300 517 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 GMFBP1-201ENST00000467831 427 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC092991.1-201ENST00000477176 376 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 HMGB1P29-201ENST00000505659 499 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC079140.3-201ENST00000511111 550 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC010493.1-201ENST00000513479 292 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL121821.2-201ENST00000556081 394 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL356432.3-201ENST00000568952 465 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC012213.3-201ENST00000577199 777 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC103987.3-201ENST00000582071 292 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC022893.3-201ENST00000607665 437 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AC093648.1-201ENST00000623546 606 ntBASIC1.51□□□□□ -2.17
SHANK1Q9Y566 AL359854.1-201ENST00000614203 1594 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 MTND5P30-201ENST00000452896 1731 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 RNU4-13P-201ENST00000364019 141 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.295-201ENST00000364918 102 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 RNU6-53P-201ENST00000365367 106 ntBASIC1.5□□□□□ -2.17
SHANK1Q9Y566 Y_RNA.354-201ENST00000365448 111 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms