Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 RNU2-23P-201ENST00000410545 195 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 POLR2J4-204ENST00000418424 324 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 C8orf59P1-201ENST00000429930 303 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 MTND2P3-201ENST00000452458 470 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 RPL31P3-201ENST00000458430 332 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 SNORA3.4-201ENST00000515969 96 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AC019176.1-201ENST00000518519 225 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 DEFB108E-201ENST00000524692 240 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 CYP3A52P-201ENST00000563326 91 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 MTCYBP33-201ENST00000575007 1130 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 MIR5708-201ENST00000579723 85 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AL391646.1-201ENST00000603860 190 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AC211469.2-201ENST00000605461 205 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AC022513.1-201ENST00000624512 117 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AC068205.3-201ENST00000636385 468 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 MTND5P35-201ENST00000557537 1720 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 AC100821.1-201ENST00000523153 2479 ntBASIC0.69□□□□□ -2.3
RNF11Q9Y3C5 RNU6-236P-201ENST00000363886 106 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 RNU6-289P-201ENST00000364093 107 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 RNU6-207P-201ENST00000384137 107 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 RNU6-622P-201ENST00000384272 103 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 RNU6-166P-201ENST00000384371 107 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC013410.2-201ENST00000422627 201 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 SNRPEP7-201ENST00000438350 220 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 RPS4XP11-201ENST00000446897 772 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 OR2AQ1P-201ENST00000451972 200 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 TPRKBP1-201ENST00000456243 481 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC130509.1-201ENST00000464158 433 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 HMGB1P30-201ENST00000492455 606 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC021451.1-201ENST00000523498 1129 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AP006587.4-201ENST00000526053 529 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 MIR4661-201ENST00000582720 75 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 VN1R87P-201ENST00000596706 487 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC022022.2-201ENST00000602989 360 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC098483.2-201ENST00000603158 454 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC112220.2-201ENST00000605513 533 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC108706.1-201ENST00000611053 297 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC023158.2-201ENST00000614876 543 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC018926.1-201ENST00000616335 435 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC112204.3-201ENST00000623822 332 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC027335.2-201ENST00000624030 375 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC095038.3-201ENST00000634439 195 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 PCMTD1P7-201ENST00000634506 357 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 AC068700.1-201ENST00000565862 3754 ntBASIC0.68□□□□□ -2.3
RNF11Q9Y3C5 HSBP1P2-201ENST00000299671 229 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 MIR19A-201ENST00000384878 82 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AL603865.2-201ENST00000401679 213 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AL357139.1-201ENST00000407792 426 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 MRPS36P1-201ENST00000421291 307 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 ISCA1P6-201ENST00000427740 390 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AL669831.1-202ENST00000428504 417 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AC117454.1-201ENST00000491120 168 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AL163195.1-201ENST00000496941 348 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 RNU6-150P-201ENST00000516237 95 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AC011604.1-201ENST00000545978 196 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AC015688.6-201ENST00000577737 104 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AC078795.2-201ENST00000602835 1252 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AC090186.1-201ENST00000605991 572 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 MIR1248-201ENST00000629190 106 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AL512643.1-201ENST00000635735 524 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 AC009541.1-201ENST00000438279 2662 ntBASIC0.67□□□□□ -2.3
RNF11Q9Y3C5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 RNU6-609P-201ENST00000365459 107 ntBASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 AC016831.2-201ENST00000417179 352 ntBASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 RPL21P111-201ENST00000418453 477 ntBASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 MTCO2P1-201ENST00000424648 477 ntBASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 AL591704.1-201ENST00000432574 275 ntBASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 AC245047.4-201ENST00000433189 144 ntBASIC0.66□□□□□ -2.3
RNF11Q9Y3C5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms