Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC103851.1-201ENST00000506833 274 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 RNU6-256P-201ENST00000516747 97 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 SNORA25.17-201ENST00000517184 124 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 RNU6-323P-201ENST00000521915 107 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 GLYCAM1-201ENST00000546596 285 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 AC091544.4-201ENST00000555268 342 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 MIR4782-201ENST00000577987 79 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 MIR5692C1-201ENST00000585309 91 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC4.34□□□□□ -1.71
CDK11AQ9UQ88 AC008264.2-201ENST00000610193 3731 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RNU6-778P-201ENST00000363269 103 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RNU6-1303P-201ENST00000364841 107 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 Y_RNA.324-201ENST00000365165 102 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 Y_RNA.356-201ENST00000365475 113 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RNU6-128P-201ENST00000383976 107 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 SNORA75B-201ENST00000384053 137 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 MIR627-201ENST00000384979 97 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RNU2-3P-201ENST00000410144 191 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RNU2-49P-201ENST00000410666 184 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RN7SKP58-201ENST00000411010 305 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RNA5SP508-201ENST00000411327 119 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 VN1R36P-201ENST00000414936 291 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 HMGB1P18-201ENST00000438801 619 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 MRPL50P4-201ENST00000446432 475 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 AL583843.1-201ENST00000456070 346 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RPS3P1-201ENST00000456781 192 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 AC128713.1-201ENST00000471495 306 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RAB11AP2-201ENST00000545905 639 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 SCOCP1-201ENST00000554676 349 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 AC104984.5-201ENST00000586878 94 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 AC104237.2-201ENST00000612456 443 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 RMST_7.1-201ENST00000621935 268 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 AC092608.2-201ENST00000624427 218 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 AC093831.2-201ENST00000624393 3427 ntBASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDK11AQ9UQ88 AL512633.1-201ENST00000399931 655 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 RNU7-138P-201ENST00000459479 64 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 AC117503.1-201ENST00000472241 394 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 FGF7P4-201ENST00000509595 295 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 RNU1-86P-201ENST00000516108 154 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 RNU1-107P-201ENST00000516617 154 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 RNU6-703P-201ENST00000516946 107 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 AC103810.1-201ENST00000579873 453 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 AL117336.2-201ENST00000602435 335 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 uc_338.15-201ENST00000615470 191 ntBASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC4.32□□□□□ -1.72
CDK11AQ9UQ88 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 RNU6-214P-201ENST00000384130 107 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 RNU6-166P-201ENST00000384371 107 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 SNORA46-201ENST00000384762 135 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 AL356057.2-201ENST00000403318 432 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 AC023141.4-201ENST00000412031 328 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 CYCSP33-201ENST00000414485 327 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 SKA2P1-201ENST00000425592 390 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 AC244505.4-201ENST00000434905 287 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 SSXP5-201ENST00000443473 287 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 RN7SL75P-201ENST00000461926 281 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 RPL23AP70-201ENST00000483361 460 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 MIR3942-201ENST00000585264 109 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 AC078899.3-201ENST00000599065 212 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 AC087045.1-201ENST00000605856 382 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 AC009233.1-201ENST00000616477 371 ntBASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.31□□□□□ -1.72
CDK11AQ9UQ88 SNORD3E-201ENST00000362899 217 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 RNA5SP68-201ENST00000363885 119 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 Y_RNA.212-201ENST00000364177 102 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 SNORD14B-201ENST00000364533 90 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 Y_RNA.301-201ENST00000364990 103 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 RNU6-750P-201ENST00000390946 107 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AL513475.1-201ENST00000406602 315 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AL139396.1-201ENST00000421137 167 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AL353729.1-201ENST00000425044 720 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AC087884.1-201ENST00000469738 328 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AC096725.1-201ENST00000514266 313 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AC105029.1-201ENST00000520250 669 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 HPRT1P3-201ENST00000539521 576 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 RPS3AP23-202ENST00000574601 686 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.3□□□□□ -1.72
CDK11AQ9UQ88 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms