Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDC42EP3Q9UKI2 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 MAPK10-253ENST00000641010 4072 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 Y_RNA.237-201ENST00000364439 102 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA29-201ENST00000384183 140 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 RNU4-70P-201ENST00000384579 139 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 SNORD78.2-201ENST00000391076 69 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 AL079342.1-201ENST00000401460 267 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA57.3-201ENST00000411095 141 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-1245P-201ENST00000411130 106 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 BPY2DP-201ENST00000422208 265 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 AC016700.2-201ENST00000446011 156 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 AL500522.2-201ENST00000448562 343 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 HMGN2P16-201ENST00000456802 261 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 MRPL42P6-201ENST00000486397 371 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA74D-201ENST00000516404 141 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA31.23-201ENST00000517219 133 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 AC011602.1-201ENST00000546484 331 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 RPL23AP97-201ENST00000568955 471 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 MIR5571-201ENST00000577998 113 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 AC073410.2-201ENST00000603240 332 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 MIR432-201ENST00000606207 94 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 AC007546.2-201ENST00000623996 360 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 FAM35BP-202ENST00000497389 3337 ntBASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDC42EP3Q9UKI2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AC073073.2-201ENST00000609827 2578 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-222P-201ENST00000362438 107 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 RNA5SP119-201ENST00000362715 117 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 Y_RNA.143-201ENST00000363520 106 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 Y_RNA.539-201ENST00000384635 107 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 MIR634-201ENST00000385208 97 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 MIR153-2-201ENST00000385225 87 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 Y_RNA.581-201ENST00000391017 97 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 RHEBP3-201ENST00000411920 351 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 HSPE1P12-201ENST00000412576 301 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AC011742.1-201ENST00000431448 434 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AC087477.1-201ENST00000465747 340 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AC110768.1-201ENST00000509222 400 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AC022080.3-201ENST00000544433 482 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 CUL1P1-201ENST00000509510 2425 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 AL133383.2-201ENST00000622958 2336 ntBASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.43□□□□□ -1.86
CDC42EP3Q9UKI2 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 HSPA8P1-201ENST00000425843 1833 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 HAUS6P2-201ENST00000433254 2404 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AL391987.6-201ENST00000305671 199 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 SNORD56.1-201ENST00000362913 68 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-137P-201ENST00000363680 108 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RNY1-201ENST00000364228 113 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-200P-201ENST00000364743 107 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 Y_RNA.352-201ENST00000365439 102 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-142P-201ENST00000384019 107 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 SNORA9-201ENST00000384215 133 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 SNORD63-201ENST00000384262 68 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RNU6-318P-201ENST00000384283 103 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 MIR32-201ENST00000384965 70 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 HSPE1P26-201ENST00000405341 275 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 MTHFD2P2-201ENST00000407725 247 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AC099548.1-201ENST00000421443 426 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 ABCF2P2-201ENST00000450549 296 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 HMGB3P17-201ENST00000504195 649 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RNU1-61P-201ENST00000516107 151 ntBASIC3.42□□□□□ -1.86
CDC42EP3Q9UKI2 RNU5B-3P-201ENST00000516601 115 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms