Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC124916.1-201ENST00000444020 547 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 C1DP4-201ENST00000455429 424 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AL162395.1-201ENST00000457882 422 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 RPL21P99-201ENST00000480369 423 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC090255.1-201ENST00000495779 349 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 MTND3P25-201ENST00000509243 135 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC074344.1-201ENST00000512823 224 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 MTCO2P4-201ENST00000517968 247 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AP002963.1-201ENST00000530590 184 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 CBX3P7-201ENST00000532876 502 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC009127.3-201ENST00000570531 403 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AL391840.1-201ENST00000571144 367 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 MTCYBP33-201ENST00000575007 1130 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC073539.2-201ENST00000597113 165 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC073410.2-201ENST00000603240 332 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AL355297.2-201ENST00000604792 129 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AL121917.1-203ENST00000605534 577 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AC245884.12-201ENST00000615364 59 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.8□□□□□ -2.12
CLCF1Q9UBD9 RNU1-72P-201ENST00000362976 153 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 RNU6-1029P-201ENST00000384109 107 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 RN7SKP158-201ENST00000410453 326 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 RNU4-46P-201ENST00000410818 138 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 RNU6-607P-201ENST00000411283 108 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AL161788.1-201ENST00000441805 169 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AC132479.1-201ENST00000449160 144 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 RPS29P15-201ENST00000458329 171 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 KLF3P2-201ENST00000465138 268 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 SNORA43.2-201ENST00000516652 128 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 RNU6-430P-201ENST00000517078 107 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 BNIP3P6-201ENST00000549284 499 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 SUB1P2-201ENST00000556401 297 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 MIR4528-201ENST00000577763 90 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AC008121.3-201ENST00000618726 433 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 YWHAEP7-203ENST00000622054 312 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 AP003400.5-201ENST00000624827 617 ntBASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CLCF1Q9UBD9 Y_RNA.77-201ENST00000362962 107 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 RNU6-348P-201ENST00000384386 107 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 RNU6-606P-201ENST00000384721 111 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 RNA5SP390-201ENST00000410191 113 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 HMGB3P2-201ENST00000411913 584 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC074117.2-201ENST00000417130 397 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AL358934.1-201ENST00000432346 324 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 HMGB1P31-201ENST00000437242 427 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC016691.1-201ENST00000441321 413 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 MTND1P18-201ENST00000448191 573 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 GMFBP1-201ENST00000467831 427 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC006512.1-201ENST00000468816 291 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 Y_RNA.688-201ENST00000516565 95 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 RNU6-1178P-201ENST00000516674 107 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 SNORA31.23-201ENST00000517219 133 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AL356057.1-201ENST00000533798 831 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 SNORD14A-201ENST00000606526 91 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 DLEU2_1.1-201ENST00000612089 120 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 DLEU2_1.2-201ENST00000614667 120 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 uc_338.15-201ENST00000615470 191 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 RMST_7.1-201ENST00000621935 268 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AL359757.2-201ENST00000624309 274 ntBASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CLCF1Q9UBD9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.78□□□□□ -2.13
CLCF1Q9UBD9 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 MTND4P1-201ENST00000457501 1466 ntBASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
CLCF1Q9UBD9 RNU6-715P-201ENST00000365204 103 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms