Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.13□□□□□ -1.75
USP35Q9P2H5 BNIP3P16-201ENST00000589779 534 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP35Q9P2H5 AC090617.7-201ENST00000623952 126 ntBASIC4.13□□□□□ -1.75
USP35Q9P2H5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC4.13□□□□□ -1.75
USP35Q9P2H5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
USP35Q9P2H5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USP35Q9P2H5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USP35Q9P2H5 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
USP35Q9P2H5 MIR22-201ENST00000362190 85 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 RNU6-1010P-201ENST00000362757 107 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 Y_RNA.86-201ENST00000363020 111 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 RNU6-527P-201ENST00000363425 104 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 AL356776.1-201ENST00000406574 447 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 RNA5SP184-201ENST00000411071 108 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 UBE2V1P4-201ENST00000425374 344 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 Z96811.1-201ENST00000445880 108 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 TRBV12-1-201ENST00000479785 344 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 RN7SKP282-201ENST00000516824 299 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 RN7SKP256-201ENST00000517201 314 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC109329.1-201ENST00000518744 317 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC090897.2-201ENST00000581715 130 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 AC009314.1-201ENST00000603871 304 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.12□□□□□ -1.75
USP35Q9P2H5 MIR622-201ENST00000638396 96 ntBASIC4.12□□□□□ -1.75
USP35Q9P2H5 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC062016.1-201ENST00000355719 319 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 RNU6-486P-201ENST00000363116 107 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 RNU6-1329P-201ENST00000365664 107 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 RPL32P35-201ENST00000415214 394 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 RPS15AP10-201ENST00000432472 382 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.11□□□□□ -1.75
USP35Q9P2H5 RPL36AP48-201ENST00000485521 314 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC018710.1-201ENST00000506509 158 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.11□□□□□ -1.75
USP35Q9P2H5 AL117351.2-201ENST00000513571 157 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.11□□□□□ -1.75
USP35Q9P2H5 COX6CP5-201ENST00000527162 228 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC007536.1-201ENST00000533382 349 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC025423.5-201ENST00000550230 219 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.11□□□□□ -1.75
USP35Q9P2H5 AL136221.1-201ENST00000621449 509 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
USP35Q9P2H5 CASC19-280ENST00000642102 1351 ntBASIC4.11□□□□□ -1.75
USP35Q9P2H5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP35Q9P2H5 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
USP35Q9P2H5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
USP35Q9P2H5 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.1□□□□□ -1.75
USP35Q9P2H5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP35Q9P2H5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
USP35Q9P2H5 Y_RNA.212-201ENST00000364177 102 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 RNU6-336P-201ENST00000364891 107 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 RNU6-827P-201ENST00000365553 106 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 SNORA18.3-201ENST00000384122 132 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 RNU6-510P-201ENST00000391239 108 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 VN1R36P-201ENST00000414936 291 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AL139281.1-201ENST00000422120 335 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 NUP35P1-201ENST00000422734 947 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC007969.2-201ENST00000441891 191 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AL109933.2-201ENST00000452651 260 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC091544.4-201ENST00000555268 342 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC005046.1-201ENST00000608515 625 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC093913.1-201ENST00000614178 329 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC024581.2-201ENST00000619986 252 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC009033.1-201ENST00000624279 431 ntBASIC4.1□□□□□ -1.75
USP35Q9P2H5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC4.1□□□□□ -1.75
USP35Q9P2H5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC4.09□□□□□ -1.75
USP35Q9P2H5 AL035425.3-201ENST00000564206 4996 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC4.09□□□□□ -1.75
USP35Q9P2H5 SNORD56.1-201ENST00000362913 68 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 SNORD114-19-201ENST00000363072 75 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 RNU6-1013P-201ENST00000384180 107 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 SNORA46-201ENST00000384762 135 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 MIR627-201ENST00000384979 97 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 RNU6-1328P-201ENST00000410938 106 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 RNU6-1245P-201ENST00000411130 106 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 RNA5SP508-201ENST00000411327 119 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 AC097463.2-201ENST00000421074 142 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 Z98742.2-201ENST00000431564 187 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC4.09□□□□□ -1.75
USP35Q9P2H5 RNU6-1037P-201ENST00000459571 107 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 AC008628.2-201ENST00000502605 298 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 RNU6-256P-201ENST00000516747 97 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 SNORA31.18-201ENST00000517043 134 ntBASIC4.09□□□□□ -1.75
USP35Q9P2H5 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.09□□□□□ -1.75
USP35Q9P2H5 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.09□□□□□ -1.75
USP35Q9P2H5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC4.09□□□□□ -1.75
USP35Q9P2H5 DUXAP9-208ENST00000622815 614 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms