Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 RNU6-1140P-201ENST00000410517 106 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 RNU2-61P-201ENST00000411069 191 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 AL358075.3-201ENST00000426289 226 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 WARS2P1-201ENST00000429678 537 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 AC069285.2-201ENST00000440210 275 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 AC007969.2-201ENST00000441891 191 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 AC084357.1-201ENST00000473404 255 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 RPL7P47-201ENST00000497299 556 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 AC016632.1-201ENST00000503994 196 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 BTF3L4P4-201ENST00000506381 449 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 Y_RNA.679-201ENST00000516416 91 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 AC106785.1-201ENST00000565935 262 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 AC025627.2-201ENST00000576220 160 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 MIR4286-201ENST00000580651 93 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 AL020997.2-201ENST00000602607 184 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 MIR6868-201ENST00000611215 58 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 AL110115.1-201ENST00000614396 364 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 SNORA43.4-201ENST00000629559 138 ntBASIC4.39□□□□□ -1.71
CNTN3Q9P232 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNTN3Q9P232 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CNTN3Q9P232 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.39□□□□□ -1.71
CNTN3Q9P232 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTN3Q9P232 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.38□□□□□ -1.71
CNTN3Q9P232 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTN3Q9P232 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.38□□□□□ -1.71
CNTN3Q9P232 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
CNTN3Q9P232 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CNTN3Q9P232 UBE2WP1-201ENST00000362030 340 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.82-201ENST00000363000 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.92-201ENST00000363043 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 RNU5F-3P-201ENST00000363767 117 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.235-201ENST00000364412 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 RNU6-1141P-201ENST00000364520 107 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.306-201ENST00000365015 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.312-201ENST00000365089 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.322-201ENST00000365151 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 RNU1-100P-201ENST00000365255 165 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 RNU6-1145P-201ENST00000384246 107 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 NDUFS5P4-201ENST00000412983 318 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.650-201ENST00000459002 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 AC109925.1-201ENST00000478069 331 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 RNU6-861P-201ENST00000516745 106 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.777-201ENST00000516982 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 RNU6-58P-201ENST00000517143 103 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 RN7SL703P-201ENST00000578485 302 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 MIR5695-201ENST00000579717 85 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.771-201ENST00000598668 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 MIR6875-201ENST00000617506 72 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 Y_RNA.789-201ENST00000622480 102 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 AC008785.1-201ENST00000624475 456 ntBASIC4.38□□□□□ -1.71
CNTN3Q9P232 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CNTN3Q9P232 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
CNTN3Q9P232 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTN3Q9P232 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CNTN3Q9P232 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
CNTN3Q9P232 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CNTN3Q9P232 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNTN3Q9P232 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 Z82217.1-201ENST00000625157 8149 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNTN3Q9P232 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNTN3Q9P232 Y_RNA.570-201ENST00000384750 101 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 MIR329-1-201ENST00000385028 80 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 SNORA46.1-201ENST00000391069 153 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 RN7SKP61-201ENST00000410642 295 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 AC004552.1-201ENST00000419089 348 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 AL691449.1-201ENST00000426570 421 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 AC078809.1-201ENST00000427601 140 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 GPM6BP3-201ENST00000442797 145 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 RPS26P3-201ENST00000470205 348 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 AC090543.2-201ENST00000483963 348 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 AC004057.1-201ENST00000485827 348 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 RNU6-567P-201ENST00000516746 107 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 IGKV3OR22-2-201ENST00000517943 313 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 HSPE1P4-201ENST00000550617 308 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 NACAP3-201ENST00000552100 481 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 MIR6500-201ENST00000622700 86 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CNTN3Q9P232 AL079305.1-201ENST00000623159 3008 ntBASIC4.37□□□□□ -1.71
CNTN3Q9P232 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.37□□□□□ -1.71
CNTN3Q9P232 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 186.6 ms