Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AL160236.1-201ENST00000556317 195 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AC015720.1-201ENST00000565251 277 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AP001004.1-201ENST00000582468 324 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AP001485.1-201ENST00000604799 199 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AC105148.1-201ENST00000604961 409 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AC025754.2-201ENST00000606491 432 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AC012409.4-201ENST00000612923 249 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AL159153.1-201ENST00000619688 317 ntBASIC1.32□□□□□ -2.2
VAPAQ9P0L0 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
VAPAQ9P0L0 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.32□□□□□ -2.2
VAPAQ9P0L0 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
VAPAQ9P0L0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RNU6-661P-201ENST00000362409 107 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RNA5SP190-201ENST00000365222 118 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RNU6-83P-201ENST00000384568 112 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RNU6-160P-201ENST00000384591 107 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RNU6-906P-201ENST00000384700 70 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 BTF3L4P1-201ENST00000413813 468 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RPL22P18-201ENST00000417197 377 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AL590556.1-201ENST00000423231 483 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 TOMM20P4-201ENST00000427861 435 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RPL37P21-201ENST00000435890 276 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AL122001.1-201ENST00000457027 370 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC114801.2-201ENST00000503825 781 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC091951.3-201ENST00000504093 246 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 MTND2P33-201ENST00000506452 1031 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC116337.1-201ENST00000509680 687 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC108078.2-201ENST00000510750 236 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC112206.4-201ENST00000515142 405 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 SNORA31.17-201ENST00000516953 127 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 RNA5SP337-201ENST00000517007 109 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AP005597.4-201ENST00000526762 229 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 MTND4LP18-201ENST00000526864 291 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 ZNF519P3-201ENST00000557158 1032 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 MIR8074-201ENST00000615081 81 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AL590240.4-201ENST00000616908 390 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AC008993.2-201ENST00000631744 806 ntBASIC1.31□□□□□ -2.2
VAPAQ9P0L0 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
VAPAQ9P0L0 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 Y_RNA.18-201ENST00000362461 102 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 RNU6-660P-201ENST00000364566 109 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 SDAD1P3-201ENST00000427380 333 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AC084290.1-201ENST00000434995 374 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 RPL39P29-201ENST00000447779 157 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AC068338.1-201ENST00000565567 176 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AC022022.2-201ENST00000602989 360 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AL645939.4-201ENST00000604495 135 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AC092106.3-201ENST00000611308 722 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 AC026585.1-201ENST00000619582 524 ntBASIC1.3□□□□□ -2.2
VAPAQ9P0L0 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
VAPAQ9P0L0 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
VAPAQ9P0L0 Y_RNA.67-201ENST00000362870 100 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AL031779.1-201ENST00000415663 330 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 MTND1P32-201ENST00000433043 938 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AL354941.1-201ENST00000438600 464 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 KATNBL1P3-201ENST00000443475 909 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AL590365.1-201ENST00000450788 243 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 RPS29P29-201ENST00000456396 171 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPAQ9P0L0 SNORD13-201ENST00000459299 104 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AC010409.1-201ENST00000487382 476 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AC008269.2-201ENST00000561915 1105 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 MIR3169-201ENST00000578032 83 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AC091135.1-201ENST00000585943 307 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 AL139286.2-201ENST00000606838 396 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 RMST_6.1-201ENST00000611980 203 ntBASIC1.29□□□□□ -2.2
VAPAQ9P0L0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.29□□□□□ -2.2
VAPAQ9P0L0 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
VAPAQ9P0L0 ZNF29P-201ENST00000225587 168 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms