Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 Z82188.1-201ENST00000436709 154 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AL031659.1-201ENST00000447075 539 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 USP9YP23-201ENST00000455085 407 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 RNY3P15-201ENST00000516297 97 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 RNU6-911P-201ENST00000516523 104 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 RN7SKP272-201ENST00000516988 232 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 IGHVII-53-1-201ENST00000519538 255 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 NACAP3-201ENST00000552100 481 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AC104581.2-201ENST00000572227 430 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 RPL23AP78-201ENST00000599928 470 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AC024220.1-201ENST00000603675 484 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AC024581.2-201ENST00000619986 252 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 MIR8062-201ENST00000621515 85 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AC092628.2-201ENST00000622492 339 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AC012442.3-202ENST00000636742 206 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 ADAM3A-203ENST00000461344 2157 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 AF127577.6-201ENST00000623352 2191 ntBASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
KCMF1Q9P0J7 MFSD8-236ENST00000641509 4050 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AP000560.1-201ENST00000624150 1937 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 Y_RNA.222-201ENST00000364264 102 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 Y_RNA.471-201ENST00000384312 102 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 SNORA1.3-201ENST00000384676 136 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AL159169.1-201ENST00000421119 127 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AL353705.4-201ENST00000449661 238 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 snoU13.28-201ENST00000459235 104 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 TOMM22P6-201ENST00000465035 409 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 SNRPGP7-201ENST00000469016 106 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 SNRPGP3-201ENST00000469405 227 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AC074250.1-201ENST00000511117 192 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AC091874.1-201ENST00000511402 339 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 SNORA25.11-201ENST00000515935 105 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 SNORA40.15-201ENST00000516884 107 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AC008011.1-201ENST00000545989 227 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AC107871.2-201ENST00000612894 502 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 DLEU2_2.2-201ENST00000615474 90 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AF117829.1-206ENST00000621883 3802 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 AP001148.1-201ENST00000624124 2359 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 MAPK10-373ENST00000641983 6772 ntBASIC3.49□□□□□ -1.85
KCMF1Q9P0J7 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 RNU4-9P-201ENST00000364951 139 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 RNU6-1318P-201ENST00000365389 103 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 MT-TG-201ENST00000387429 68 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 AC074117.2-201ENST00000417130 397 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 BPY2DP-201ENST00000422208 265 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 AL358453.1-201ENST00000422522 250 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 RPL23AP82-202ENST00000427528 469 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 AC005300.1-201ENST00000428401 373 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 HMGN2P10-201ENST00000448085 265 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 RPL23AP62-201ENST00000463396 453 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 RPL30P14-201ENST00000482744 348 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 Y_RNA.668-201ENST00000516233 93 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 AC109329.1-201ENST00000518744 317 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 AC091144.1-201ENST00000519573 138 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 IGHV3-76-201ENST00000522465 295 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 MIR3668-201ENST00000582138 75 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 HMGN2P15-201ENST00000585707 270 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 AC078899.3-201ENST00000599065 212 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 AC002076.2-201ENST00000617362 122 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 MIR6076-201ENST00000617521 113 ntBASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
KCMF1Q9P0J7 Z75746.1-201ENST00000440243 2080 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 Y_RNA.26-201ENST00000362539 101 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 Y_RNA.64-201ENST00000362845 102 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 Y_RNA.276-201ENST00000364732 109 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RNU6-806P-201ENST00000365147 105 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 RPL21P40-201ENST00000428586 483 ntBASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.47□□□□□ -1.85
KCMF1Q9P0J7 AL590664.1-201ENST00000448065 339 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms