Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AC092798.1-201ENST00000458542 409 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 MTND5P5-201ENST00000503764 376 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-1153P-201ENST00000516760 105 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AC087854.1-201ENST00000519706 414 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AP005597.4-201ENST00000526762 229 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AL356055.1-201ENST00000602528 446 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AC024153.1-201ENST00000603103 365 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AL050343.2-201ENST00000607338 280 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 RMST_4.1-201ENST00000616886 107 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 AC002064.3-201ENST00000623448 346 ntBASIC2.82□□□□□ -1.96
SMARCAL1Q9NZC9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 SNORD56.5-201ENST00000364281 72 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 RNU1-112P-201ENST00000364401 164 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 MIR10A-201ENST00000385043 110 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 UBA52P6-201ENST00000399822 382 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC074085.1-201ENST00000413598 418 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AL359672.1-201ENST00000442302 409 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC107399.1-201ENST00000451226 265 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 snoU109.2-201ENST00000459316 135 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 RNU7-138P-201ENST00000459479 64 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC092436.3-201ENST00000511788 257 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-559P-201ENST00000516151 98 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC104576.1-201ENST00000524225 88 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 HSPE1P20-201ENST00000538133 289 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC004486.1-201ENST00000546846 233 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 FRG2DP-202ENST00000566967 323 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 MIR4635-201ENST00000583759 79 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AC020895.1-201ENST00000595362 272 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AL451007.1-201ENST00000595491 289 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 AL356575.1-201ENST00000603008 283 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 HSPE1P7-201ENST00000604681 321 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 U6.99-201ENST00000637524 83 ntBASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.81□□□□□ -1.96
SMARCAL1Q9NZC9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC138915.1-201ENST00000565427 1685 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-37P-201ENST00000362692 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-884P-201ENST00000363889 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-11P-201ENST00000364234 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-7-201ENST00000364784 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-8-201ENST00000365467 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-25P-201ENST00000383873 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-1-201ENST00000383898 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.384-201ENST00000383909 102 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 Y_RNA.387-201ENST00000383918 102 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 SNORD21-201ENST00000383953 95 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-48P-201ENST00000384161 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-36P-201ENST00000384172 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-4P-201ENST00000384205 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-5P-201ENST00000384238 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-3P-201ENST00000384314 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-16P-201ENST00000384385 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-15P-201ENST00000384534 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-658P-201ENST00000384606 106 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-2-201ENST00000384627 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-29P-201ENST00000384637 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-9-201ENST00000384776 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU6-33P-201ENST00000384793 107 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 MIR592-201ENST00000384959 97 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AL356057.2-201ENST00000403318 432 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNA5SP492-201ENST00000411330 114 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RPL37P10-201ENST00000412884 288 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC099548.1-201ENST00000421443 426 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 SKA2P1-201ENST00000425592 390 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC098614.2-201ENST00000426040 255 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AL139132.1-201ENST00000431587 344 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 BRK1P2-201ENST00000442875 223 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AL078601.1-201ENST00000444542 271 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 MTND1P17-201ENST00000448961 204 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RPS29P20-201ENST00000489592 171 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RNU1-103P-201ENST00000516502 125 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC069113.1-201ENST00000517763 267 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 CKS1BP7-201ENST00000522230 235 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC079600.2-201ENST00000550076 130 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC026371.1-201ENST00000551867 419 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 AC007151.1-201ENST00000572774 483 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 RPL23AP78-201ENST00000599928 470 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 ELOCP5-201ENST00000604924 333 ntBASIC2.8□□□□□ -1.96
SMARCAL1Q9NZC9 MTND4LP5-201ENST00000605152 292 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms