Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.5□□□□□ -2.17
CLN6Q9NWW5 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
CLN6Q9NWW5 MIR449A-201ENST00000362113 91 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 RNU6-371P-201ENST00000364283 108 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 SNORA20.2-201ENST00000383922 131 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 RNA5SP508-201ENST00000411327 119 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 RPS15AP10-201ENST00000432472 382 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 RPL39P29-201ENST00000447779 157 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 EPS15P1-201ENST00000448836 336 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 RPL30P1-201ENST00000488676 339 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AP002453.2-201ENST00000533503 320 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.5□□□□□ -2.17
CLN6Q9NWW5 MIR4435-1-201ENST00000582552 80 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AL136363.2-201ENST00000604173 851 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC103810.8-201ENST00000607347 118 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AL451064.1-201ENST00000607718 471 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC068944.2-201ENST00000610373 403 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC063943.3-201ENST00000615562 356 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC099842.1-201ENST00000619919 596 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 RMST_7.1-201ENST00000621935 268 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 AC099654.13-201ENST00000639774 207 ntBASIC1.5□□□□□ -2.17
CLN6Q9NWW5 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AP000648.3-201ENST00000623539 4507 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 RNU6-1164P-201ENST00000364428 107 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 RNU4-42P-201ENST00000364738 142 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 RNA5SP501-201ENST00000410990 112 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 VN1R36P-201ENST00000414936 291 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AL593851.1-201ENST00000426171 157 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AL591043.1-201ENST00000432461 424 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 RPL7P54-201ENST00000438336 674 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 RPL30P6-201ENST00000475925 342 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AC116562.3-201ENST00000506136 177 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AC068587.5-201ENST00000528506 175 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AC074050.1-201ENST00000563247 211 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 DEFB122-202ENST00000569013 197 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 MIR3908-201ENST00000579798 126 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 MIR4648-201ENST00000580107 72 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AL121992.2-201ENST00000606262 256 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 RMST_4.1-201ENST00000616886 107 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AL159153.1-201ENST00000619688 317 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 SCARNA15.3-201ENST00000626315 122 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 SCARNA4.1-201ENST00000628597 123 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.49□□□□□ -2.17
CLN6Q9NWW5 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CLN6Q9NWW5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 RNU6-527P-201ENST00000363425 104 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC009310.1-201ENST00000414414 451 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 CALM2P2-201ENST00000428512 440 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 CBX3P6-201ENST00000430257 527 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC000111.3-201ENST00000433478 193 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 UBE2D3P4-201ENST00000441973 436 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AL122001.1-201ENST00000457027 370 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC023790.1-201ENST00000482174 347 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 ANXA2P1-201ENST00000505539 926 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC008834.1-201ENST00000511612 175 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 RNU6-685P-201ENST00000517088 95 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 RNU6-1220P-201ENST00000517126 108 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 MIR4285-201ENST00000581001 85 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC005771.1-201ENST00000585581 349 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC027449.1-201ENST00000608890 407 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 uc_338.5-201ENST00000611839 155 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC004223.4-201ENST00000612426 332 ntBASIC1.48□□□□□ -2.17
CLN6Q9NWW5 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLN6Q9NWW5 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 RN7SKP101-201ENST00000411376 320 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 MTATP6P16-201ENST00000434543 526 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 RPL32P28-201ENST00000443577 397 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.47□□□□□ -2.17
CLN6Q9NWW5 MTND3P25-201ENST00000509243 135 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 MTCYBP40-201ENST00000509390 1135 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 AC093259.1-201ENST00000509755 300 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 RNU6-991P-201ENST00000516168 107 ntBASIC1.47□□□□□ -2.17
CLN6Q9NWW5 SCARNA24.1-201ENST00000516465 137 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms