Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 AL159153.1-201ENST00000619688 317 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AL136221.1-201ENST00000621449 509 ntBASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CHMP1AQ9HD42 AL035425.3-201ENST00000564206 4996 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 OR56A5-201ENST00000340110 738 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 SNORD113-7-201ENST00000363762 77 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 Y_RNA.414-201ENST00000384011 101 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 RNU1-57P-201ENST00000384491 166 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 MIR134-201ENST00000385258 73 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AL445529.1-201ENST00000398713 389 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 VN1R36P-201ENST00000414936 291 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 MTCO3P18-201ENST00000440206 761 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC104389.3-201ENST00000445629 235 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 RPL7P12-201ENST00000446719 750 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 Z75741.1-201ENST00000446793 314 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 RPL39P29-201ENST00000447779 157 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC090515.1-201ENST00000465295 476 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC090096.1-201ENST00000489168 390 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 RPL39P5-202ENST00000512505 151 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 HPRT1P3-201ENST00000539521 576 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC034105.4-201ENST00000568304 277 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC105137.2-201ENST00000569073 466 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC060780.3-201ENST00000589464 80 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 AC073410.2-201ENST00000603240 332 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 uc_338.15-201ENST00000615470 191 ntBASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.48□□□□□ -2.01
CHMP1AQ9HD42 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC073325.2-201ENST00000339545 159 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 Y_RNA.86-201ENST00000363020 111 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 SNORA9.2-201ENST00000365361 133 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 RNU6-831P-201ENST00000384548 107 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 SNAP23P1-201ENST00000433229 246 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 USP9YP8-201ENST00000441913 500 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 EEF1B2P7-201ENST00000451177 676 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 PRSS3P4-201ENST00000453323 162 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 RN7SL297P-201ENST00000483161 293 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC140059.1-201ENST00000489238 361 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC100830.2-201ENST00000581636 240 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 MIR3672-201ENST00000584290 82 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 MIR3942-201ENST00000585264 109 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC018638.8-201ENST00000588755 281 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC009314.1-201ENST00000603871 304 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 AC009233.1-201ENST00000616477 371 ntBASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.47□□□□□ -2.01
CHMP1AQ9HD42 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 SNORA71.1-201ENST00000364523 117 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 RNU6-214P-201ENST00000384130 107 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 RNU6-1072P-201ENST00000384703 107 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 RNU6-443P-201ENST00000384780 107 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 MIR512-1-201ENST00000384913 84 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AIMP1P2-201ENST00000425294 312 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 SUMO1P4-201ENST00000429430 302 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 RBMX2P4-201ENST00000441256 376 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AL031659.1-201ENST00000447075 539 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 snoU13.14-201ENST00000459372 104 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AC073901.1-201ENST00000462471 408 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AC091153.1-201ENST00000466297 402 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AC008526.1-201ENST00000509149 338 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 RNU2-53P-201ENST00000516257 147 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 RNU6-256P-201ENST00000516747 97 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AC107953.1-201ENST00000522216 297 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AP002404.1-201ENST00000532005 451 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 TRAV32-201ENST00000553993 340 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 MIR5571-201ENST00000577998 113 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AL162274.2-201ENST00000614406 332 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 AL138726.1-201ENST00000614873 333 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 U6.105-201ENST00000637379 88 ntBASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
CHMP1AQ9HD42 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 AC002543.1-201ENST00000299783 1954 ntBASIC2.45□□□□□ -2.02
CHMP1AQ9HD42 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms