Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC243829.7-201ENST00000633081 225 ntBASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.28□□□□□ -2.2
SND1-IT1Q9HBX3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.21
SND1-IT1Q9HBX3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AL136360.1-201ENST00000503377 1900 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC233981.2-201ENST00000611524 1614 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 CBX3P1-201ENST00000325243 554 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 U8.3-201ENST00000363321 132 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 RNA5SP387-201ENST00000364226 106 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 Y_RNA.333-201ENST00000365274 102 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-45P-201ENST00000384471 107 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 SNORA48.1-201ENST00000390879 135 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-550P-201ENST00000391057 101 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AL031577.2-201ENST00000404133 280 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 Y_RNA.597-201ENST00000410463 100 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 RNU4-53P-201ENST00000410828 140 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-1245P-201ENST00000411130 106 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 CYCSP33-201ENST00000414485 327 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 GPR143P-201ENST00000434155 205 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC027575.1-201ENST00000481064 460 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC022447.4-201ENST00000504053 364 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 HMGB3P17-201ENST00000504195 649 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 SNORD27.1-201ENST00000516319 72 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-232P-201ENST00000517144 64 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC109479.2-201ENST00000517842 174 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AP002453.2-201ENST00000533503 320 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 GNAI2P1-201ENST00000541815 315 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 TRAV32-201ENST00000553993 340 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 MIR5089-201ENST00000580047 84 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AC018889.1-201ENST00000605372 397 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 AL022345.1-201ENST00000607292 135 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 U6.114-201ENST00000636407 96 ntBASIC1.27□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-527P-201ENST00000363425 104 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-1097P-201ENST00000363586 107 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-105P-201ENST00000363909 104 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-553P-201ENST00000364047 96 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-108P-201ENST00000365558 107 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-160P-201ENST00000384591 107 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 MIR597-201ENST00000384968 97 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 MIR454-201ENST00000390180 115 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 RNA5SP501-201ENST00000410990 112 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AL035666.1-201ENST00000446195 348 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AC112492.4-201ENST00000456549 352 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-333P-201ENST00000459117 107 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 BZW1P2-201ENST00000473537 826 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AC132942.1-201ENST00000486753 483 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 ANXA2P1-201ENST00000505539 926 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AC093259.1-201ENST00000509755 300 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AC008834.1-201ENST00000511612 175 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AC108043.1-201ENST00000512696 574 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AC103987.3-201ENST00000582071 292 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 SEPT7P9-203ENST00000604116 343 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AP000654.2-201ENST00000605633 586 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AC103810.8-201ENST00000607347 118 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 uc_338.11-201ENST00000619132 160 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AL391262.2-201ENST00000622466 494 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AL603839.4-201ENST00000624658 1005 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 AP000560.1-201ENST00000624150 1937 ntBASIC1.26□□□□□ -2.21
SND1-IT1Q9HBX3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-1285P-201ENST00000363480 105 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 SNORA16.1-201ENST00000364597 132 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 RNU6-116P-201ENST00000384042 109 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 AL357139.1-201ENST00000407792 426 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 MIR1294-201ENST00000408503 142 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 RNU4-46P-201ENST00000410818 138 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 HMGN1P14-201ENST00000412459 517 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 MTND3P17-201ENST00000416968 344 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 RPL31P63-201ENST00000422565 375 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 AC009961.2-201ENST00000435771 251 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 AL122001.1-201ENST00000457027 370 ntBASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.25□□□□□ -2.21
SND1-IT1Q9HBX3 AC079140.5-201ENST00000507882 310 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms