Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 MIR3910-1-201ENST00000580936 111 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC020895.1-201ENST00000595362 272 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 UBE2Q2P6-201ENST00000612666 153 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC027309.3-201ENST00000623419 351 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC091903.1-201ENST00000624322 454 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 SCARNA4-202ENST00000625402 129 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AC006504.1-201ENST00000562493 3666 ntBASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.46□□□□□ -1.86
SEC61A2Q9H9S3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 MIR411-201ENST00000362239 96 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 RNU4-90P-201ENST00000362773 141 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-898P-201ENST00000365627 104 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-17P-201ENST00000384245 107 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-18P-201ENST00000384527 107 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 AL033519.2-201ENST00000403958 392 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 COX6CP10-201ENST00000416832 224 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 AL500522.2-201ENST00000448562 343 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 AP000870.1-201ENST00000472927 406 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 SNORA25.14-201ENST00000516481 132 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 CBX3P4-201ENST00000538909 354 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 CYCSP39-201ENST00000565821 309 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 AL606490.9-201ENST00000603331 271 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 RPL23AP88-201ENST00000605759 454 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 SCARNA4-201ENST00000629045 128 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 AC022893.2-201ENST00000564832 3296 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 AL359693.1-201ENST00000614959 2407 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.45□□□□□ -1.86
SEC61A2Q9H9S3 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 Y_RNA.44-201ENST00000362676 108 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RNA5SP361-201ENST00000362686 118 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RNU1-18P-201ENST00000363062 164 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 Z98749.2-208ENST00000381646 500 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-140P-201ENST00000384566 108 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-658P-201ENST00000384606 106 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 U3.37-201ENST00000408528 213 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RAB9AP3-201ENST00000412737 573 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AC083863.1-201ENST00000438811 231 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RPS15AP7-201ENST00000439294 405 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 Z82210.1-201ENST00000440037 231 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AL031659.1-201ENST00000447075 539 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RAB9AP1-201ENST00000449393 573 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 SNRPGP7-201ENST00000469016 106 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AC020593.1-201ENST00000507399 299 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-1183P-201ENST00000517054 60 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AP006245.1-201ENST00000522549 120 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 YPEL5P3-201ENST00000547227 352 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AC005255.1-201ENST00000593748 216 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AL020997.2-201ENST00000602607 184 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AL391261.4-201ENST00000616012 481 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 AC135776.4-201ENST00000624300 1904 ntBASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
SEC61A2Q9H9S3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AC008568.2-201ENST00000623862 2313 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-662P-201ENST00000384253 104 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 Y_RNA.464-201ENST00000384282 110 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 HMGN2P8-201ENST00000391458 268 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 EIF1P2-201ENST00000428233 350 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AC005002.2-201ENST00000438228 269 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AC087477.1-201ENST00000465747 340 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 RPL31P13-201ENST00000484151 370 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AF186996.7-201ENST00000492781 209 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AC074198.2-201ENST00000508153 258 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-861P-201ENST00000516745 106 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 RNU6-1231P-201ENST00000517185 103 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AC022559.1-201ENST00000520905 205 ntBASIC3.43□□□□□ -1.86
SEC61A2Q9H9S3 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 128.5 ms