Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 MIR29B2-201ENST00000385055 81 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 RNU6-1242P-201ENST00000391052 103 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC0.99□□□□□ -2.25
VCX3BQ9H321 AL353777.1-201ENST00000425552 326 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 TRIM60P10Y-201ENST00000425589 751 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AL627311.1-201ENST00000431514 115 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AC027119.1-201ENST00000440877 241 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 PRPS1P1-201ENST00000445305 876 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 NDUFB1P2-201ENST00000449477 176 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AL353752.1-201ENST00000454946 260 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC0.99□□□□□ -2.25
VCX3BQ9H321 ANKRD20A9P-201ENST00000457997 2978 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 snoU109.2-201ENST00000459316 135 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AC087477.1-201ENST00000465747 340 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AC112206.3-201ENST00000514578 389 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.99□□□□□ -2.25
VCX3BQ9H321 AC105185.1-201ENST00000518705 535 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC0.99□□□□□ -2.25
VCX3BQ9H321 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC0.99□□□□□ -2.25
VCX3BQ9H321 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.99□□□□□ -2.25
VCX3BQ9H321 YWHAZP1-201ENST00000556286 722 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.99□□□□□ -2.25
VCX3BQ9H321 SNORA77B-201ENST00000578179 125 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AC078795.2-201ENST00000602835 1252 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 AP000484.1-201ENST00000620067 1252 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 ICE2P2-201ENST00000483823 2787 ntBASIC0.99□□□□□ -2.25
VCX3BQ9H321 MTND4P16-201ENST00000466108 1367 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 MIR302D-201ENST00000362275 68 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 RNU6-212P-201ENST00000362642 104 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 Y_RNA.99-201ENST00000363138 105 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 RNA5SP190-201ENST00000365222 118 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 RNU6-757P-201ENST00000410334 100 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 BTF3P4-201ENST00000418852 495 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.98□□□□□ -2.25
VCX3BQ9H321 FDX1P2-201ENST00000450769 375 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 AC010409.1-201ENST00000487382 476 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 AC134050.1-201ENST00000495088 933 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 AC079140.2-201ENST00000506193 142 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC0.98□□□□□ -2.25
VCX3BQ9H321 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC0.98□□□□□ -2.25
VCX3BQ9H321 Y_RNA.689-201ENST00000516589 107 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 RNU6-1003P-201ENST00000517099 105 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.98□□□□□ -2.25
VCX3BQ9H321 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.98□□□□□ -2.25
VCX3BQ9H321 AC011494.1-201ENST00000596454 237 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 AL138889.2-201ENST00000603883 242 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 AC013244.3-201ENST00000605614 388 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 AC018645.2-201ENST00000609151 472 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 AC097478.2-201ENST00000610572 514 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 SCARNA4-202ENST00000625402 129 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 SCARNA15.3-201ENST00000626315 122 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 SCARNA4.1-201ENST00000628597 123 ntBASIC0.98□□□□□ -2.25
VCX3BQ9H321 OR4G2P-201ENST00000328113 903 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 RNU6-743P-201ENST00000364151 106 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 RNY4P16-201ENST00000364768 94 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 RPS20P2-201ENST00000402520 389 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 RNU4-26P-201ENST00000410270 107 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 AL035407.1-201ENST00000429211 571 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 RPL23AP30-201ENST00000432419 501 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 PGBD4P5-201ENST00000445958 426 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 AL031313.1-201ENST00000448435 256 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 MTND1P12-201ENST00000455231 147 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 RNU2-10P-201ENST00000516375 211 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 Y_RNA.687-201ENST00000516558 91 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 RNU6-295P-201ENST00000516901 104 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 RNU6-201P-201ENST00000517100 61 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 AC107934.1-201ENST00000522215 217 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 CENPUP1-201ENST00000526649 1202 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 BNIP3P22-201ENST00000593399 556 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 AC112187.2-201ENST00000604345 283 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.97□□□□□ -2.25
VCX3BQ9H321 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
VCX3BQ9H321 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
VCX3BQ9H321 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.97□□□□□ -2.25
VCX3BQ9H321 AL445523.1-201ENST00000451184 1362 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
VCX3BQ9H321 snoU2_19.1-201ENST00000362361 80 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 RNU6-931P-201ENST00000363850 107 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 ZNF736P1Y-201ENST00000440402 1276 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 RPL32P28-201ENST00000443577 397 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 GDI2P2-201ENST00000445131 608 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 RPL30P12-201ENST00000474666 353 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 RPS23P4-201ENST00000487908 423 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 HMGN1P13-201ENST00000505795 138 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 MTCYBP40-201ENST00000509390 1135 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 AC093259.1-201ENST00000509755 300 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.96□□□□□ -2.26
VCX3BQ9H321 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.96□□□□□ -2.26
VCX3BQ9H321 AL356057.1-201ENST00000533798 831 ntBASIC0.96□□□□□ -2.26
VCX3BQ9H321 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
VCX3BQ9H321 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms