Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 AC009163.5-201ENST00000575421 637 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 MIR5007-201ENST00000583098 95 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 AL356575.1-201ENST00000603008 283 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 AC096772.1-201ENST00000609146 564 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 RMST_3.1-201ENST00000611651 109 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 AC002553.4-201ENST00000616896 331 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 MIR7157-201ENST00000635801 60 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 AC024614.3-201ENST00000637860 256 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.94□□□□□ -1.94
USP44Q9H0E7 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
USP44Q9H0E7 AC026241.1-201ENST00000517873 2142 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 MTND5P6-201ENST00000422338 1798 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP44Q9H0E7 SNORD114-30-201ENST00000364448 72 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AL513475.1-201ENST00000406602 315 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 RNU4-53P-201ENST00000410828 140 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 RNU6-373P-201ENST00000411247 98 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AL096701.2-201ENST00000416920 238 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 MRPS10P2-201ENST00000431226 381 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 RPL21P2-201ENST00000440049 481 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 NFU1P2-201ENST00000448700 469 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AC012308.1-201ENST00000451232 178 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 MTND3P16-201ENST00000452205 344 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AC069439.1-201ENST00000494739 167 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
USP44Q9H0E7 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 BNIP3P6-201ENST00000549284 499 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 OR11H5P-201ENST00000554039 926 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 SNORD53-201ENST00000579969 78 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 AC010525.2-201ENST00000590920 195 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AL449363.1-201ENST00000617815 186 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AL590808.1-201ENST00000618696 141 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 RMST_7.1-201ENST00000621935 268 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AC138627.2-201ENST00000624202 601 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 Z69720.2-201ENST00000624755 279 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 AP003400.5-201ENST00000624827 617 ntBASIC2.93□□□□□ -1.94
USP44Q9H0E7 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
USP44Q9H0E7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.93□□□□□ -1.94
USP44Q9H0E7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.92□□□□□ -1.94
USP44Q9H0E7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.92□□□□□ -1.94
USP44Q9H0E7 RNU6-877P-201ENST00000383868 107 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 RPL21P75-201ENST00000396599 483 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 RPL21P28-201ENST00000401418 483 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 RNA5SP118-201ENST00000410385 109 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 MTND1P23-201ENST00000416931 372 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AL513477.1-202ENST00000417061 214 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AC016831.2-201ENST00000417179 352 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AL139413.1-201ENST00000421309 217 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.92□□□□□ -1.94
USP44Q9H0E7 RPL21P39-201ENST00000463605 483 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 RPL21P93-201ENST00000480465 489 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AC087190.1-201ENST00000484462 480 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 MRPL42P6-201ENST00000486397 371 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AC093591.1-201ENST00000491435 481 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 RPL21P16-201ENST00000495531 483 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 RNA5SP281-201ENST00000516504 135 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.92□□□□□ -1.94
USP44Q9H0E7 CENPUP1-201ENST00000526649 1202 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.92□□□□□ -1.94
USP44Q9H0E7 AL118558.2-201ENST00000556294 238 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AC060766.3-201ENST00000591442 263 ntBASIC2.92□□□□□ -1.94
USP44Q9H0E7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.92□□□□□ -1.94
USP44Q9H0E7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
USP44Q9H0E7 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 OR4G1P-203ENST00000641984 1631 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 RNU6-942P-201ENST00000363002 107 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 RNU4-66P-201ENST00000365199 138 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 RNU6-1283P-201ENST00000365314 105 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 RNU6-843P-201ENST00000384454 104 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 MIR514A2-201ENST00000385131 88 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 MIR514A3-201ENST00000385132 88 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 SNORA3.2-201ENST00000408221 125 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 BX682237.1-201ENST00000415016 335 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 MTND1P2-201ENST00000430604 821 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 RPS15AP28-201ENST00000435088 386 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 RBMX2P4-201ENST00000441256 376 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 Z96811.1-201ENST00000445880 108 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 AP000705.1-201ENST00000454567 350 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 Y_RNA.654-201ENST00000497848 106 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 AC008413.1-201ENST00000511864 177 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 AC008549.1-201ENST00000512900 643 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 RNU6-1038P-201ENST00000516516 104 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 AC090115.3-201ENST00000553218 849 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 AC091544.4-201ENST00000555268 342 ntBASIC2.91□□□□□ -1.94
USP44Q9H0E7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.91□□□□□ -1.94
USP44Q9H0E7 AC103705.1-201ENST00000619013 241 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms