Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 Y_RNA.404-201ENST00000383978 102 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 RNU6-843P-201ENST00000384454 104 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 MIR147B-201ENST00000390185 80 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 BTF3L4P2-201ENST00000392798 346 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 RPL21P40-201ENST00000428586 483 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 RPL23AP83-201ENST00000434984 473 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 MTCO3P10-201ENST00000455912 772 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC027575.1-201ENST00000481064 460 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC093663.1-201ENST00000497190 394 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC005741.1-201ENST00000511094 432 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC093303.1-201ENST00000514549 295 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 DNAJC8P1-201ENST00000554535 372 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC010653.1-201ENST00000571108 881 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 MIR3922-201ENST00000585192 84 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC078795.3-201ENST00000602913 472 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AL133393.1-201ENST00000603277 287 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AC091152.3-201ENST00000604227 325 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AL162713.1-201ENST00000604480 262 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 MTND5P19-201ENST00000424872 1794 ntBASIC3.23□□□□□ -1.89
TRIM54Q9BYV2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 SNORA70.4-201ENST00000365509 134 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 RNU6-842P-201ENST00000384269 107 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 MTCO3P13-201ENST00000577757 781 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 MIR4444-1-201ENST00000581696 74 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 MIR4444-2-201ENST00000584390 74 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 AC107294.3-201ENST00000609211 526 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 AC241585.2-209ENST00000638217 143 ntBASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
TRIM54Q9BYV2 AC103988.1-201ENST00000566382 2177 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 MIR148B-201ENST00000362252 99 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RNU6-487P-201ENST00000365430 104 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 XGY1-201ENST00000381172 446 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 SNORA75.6-201ENST00000391318 127 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 AL591034.2-201ENST00000402839 359 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RNU6-174P-201ENST00000410406 106 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 AP000275.1-201ENST00000411943 390 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RPL32P35-201ENST00000415214 394 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RPS27P26-201ENST00000494583 239 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 GZMAP1-201ENST00000503054 631 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RNU1-143P-201ENST00000516296 146 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RNU6-1153P-201ENST00000516760 105 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 SNORA31.23-201ENST00000517219 133 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 AC245166.1-201ENST00000521012 253 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 AP000889.1-201ENST00000530968 660 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 AP001836.1-201ENST00000604675 523 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 U1.23-201ENST00000610293 146 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RNU1-68P-201ENST00000615382 146 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 U1.39-201ENST00000621562 146 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 AC092608.2-201ENST00000624427 218 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.21□□□□□ -1.9
TRIM54Q9BYV2 RNU1-140P-201ENST00000365040 165 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 CD24P4-201ENST00000382840 243 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 Y_RNA.394-201ENST00000383942 103 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 RNU6-1027P-201ENST00000383998 107 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 RNU6-890P-201ENST00000384121 107 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 MIR449B-201ENST00000384995 97 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AL354751.2-201ENST00000415471 210 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AC243964.1-201ENST00000441814 261 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 RN7SL293P-201ENST00000481765 281 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AC097462.2-201ENST00000504623 481 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 SCARNA16.2-201ENST00000516520 172 ntBASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.2□□□□□ -1.9
TRIM54Q9BYV2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms