Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 AC007969.2-201ENST00000441891 191 ntBASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 MTND1P27-201ENST00000451117 902 ntBASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 MTND3P25-201ENST00000509243 135 ntBASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 SNRPGP18-201ENST00000553000 214 ntBASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 U1.36-201ENST00000620684 176 ntBASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 AC097520.1-201ENST00000624435 385 ntBASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 AC064859.1-201ENST00000624741 174 ntBASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 AP000560.1-201ENST00000624150 1937 ntBASIC3.03□□□□□ -1.92
CHMP4AQ9BY43 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 Y_RNA.201-201ENST00000364052 96 ntBASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 RNU6-297P-201ENST00000384636 107 ntBASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 RPL31P35-201ENST00000431058 377 ntBASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 AC079448.1-201ENST00000449377 373 ntBASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 AP003392.2-201ENST00000527269 208 ntBASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 MIR3136-201ENST00000583498 78 ntBASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 Z99497.2-201ENST00000603634 310 ntBASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 AC091834.1-201ENST00000614543 472 ntBASIC3.02□□□□□ -1.93
CHMP4AQ9BY43 MIR6073-201ENST00000352083 89 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 RNU6-434P-201ENST00000384376 107 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 SNORD14D-201ENST00000384390 87 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 AC098826.2-201ENST00000452011 651 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 RPL23AP3-201ENST00000453844 468 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 AC103987.3-201ENST00000582071 292 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 BNIP3P16-201ENST00000589779 534 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 AC243960.4-201ENST00000600532 288 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 AL590229.1-201ENST00000603497 542 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 RMST_6.1-201ENST00000611980 203 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 AC009161.2-201ENST00000624626 138 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 ZNF702P-202ENST00000434269 1966 ntBASIC3.01□□□□□ -1.93
CHMP4AQ9BY43 Y_RNA.324-201ENST00000365165 102 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 SNORD116-8-201ENST00000384365 95 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 RNA5SP425-201ENST00000410336 112 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 RNU6-248P-201ENST00000410720 107 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 RN7SKP142-201ENST00000411236 328 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 CYCSP33-201ENST00000414485 327 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 BX295541.1-201ENST00000417774 250 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 RPS15AP10-201ENST00000432472 382 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 RNU6-377P-201ENST00000515965 102 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC3□□□□□ -1.93
CHMP4AQ9BY43 AC078795.2-201ENST00000602835 1252 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 AL359314.1-201ENST00000616913 261 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 AL132822.1-201ENST00000617063 513 ntBASIC3□□□□□ -1.93
CHMP4AQ9BY43 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3□□□□□ -1.93
CHMP4AQ9BY43 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CHMP4AQ9BY43 RNU6-715P-201ENST00000365204 103 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 DEFA7P-201ENST00000382676 285 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 RNU6-301P-201ENST00000384277 107 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AL356432.1-201ENST00000405809 419 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 RPL23AP6-201ENST00000446637 472 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 MTND1P18-201ENST00000448191 573 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AC079804.2-201ENST00000490376 200 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AP002963.1-201ENST00000530590 184 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AC023050.3-201ENST00000541142 333 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 MIR3913-1-201ENST00000577744 102 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AC046143.2-201ENST00000609789 160 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 AC022418.1-201ENST00000624118 445 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.99□□□□□ -1.93
CHMP4AQ9BY43 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AC069528.2-201ENST00000624849 1991 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 Y_RNA.40-201ENST00000362645 93 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 Y_RNA.99-201ENST00000363138 105 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 RNU6-105P-201ENST00000363909 104 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 RNU4-56P-201ENST00000364700 142 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 U8.8-201ENST00000365399 135 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 RNA5SP212-201ENST00000391223 107 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 BTF3P7-201ENST00000407097 488 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 SNORA11.2-201ENST00000408318 127 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 RNA5SP181-201ENST00000410246 98 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 RNU2-29P-201ENST00000410423 189 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AC000111.3-201ENST00000433478 193 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 PMCHL2-203ENST00000457791 237 ntBASIC2.98□□□□□ -1.93
CHMP4AQ9BY43 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms