Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 VPS8-228ENST00000628962 207 ntTSL 5 BASIC1.8□□□□□ -2.12
RSPO3Q9BXY4 MTND5P42-201ENST00000637720 498 ntBASIC1.8□□□□□ -2.12
RSPO3Q9BXY4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.8□□□□□ -2.12
RSPO3Q9BXY4 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
RSPO3Q9BXY4 CENPCP1-201ENST00000533085 2578 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 UBE2L2-201ENST00000254302 429 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 Y_RNA.238-201ENST00000364441 102 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 SNORA4.3-201ENST00000365564 137 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 Y_RNA.534-201ENST00000384599 112 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 MIR181A1-201ENST00000385026 110 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 MIR454-201ENST00000390180 115 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 SNORD115-47-201ENST00000391226 86 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AL590002.1-201ENST00000406554 418 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 RNU2-20P-201ENST00000410425 191 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 RNU6-1140P-201ENST00000410517 106 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 RNA5SP489-201ENST00000410986 109 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 OR51A5P-201ENST00000415429 942 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 MTCYBP8-201ENST00000422855 651 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC092047.1-201ENST00000424997 240 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 USP9YP18-201ENST00000425912 695 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC007919.1-201ENST00000429380 217 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 GTF2IP20-201ENST00000431663 360 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 MTND3P21-201ENST00000433774 331 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 PIGFP3-201ENST00000441918 722 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 HMGN2P23-201ENST00000456759 269 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 RPS29P15-201ENST00000458329 171 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC079382.1-201ENST00000493346 557 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC098591.2-201ENST00000510152 315 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AF213884.2-201ENST00000510417 903 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 RN7SKP219-201ENST00000516825 296 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 RNU6-835P-201ENST00000516974 104 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC022634.1-201ENST00000520765 532 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 OR5AQ1P-201ENST00000527596 927 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 OR5AL2P-201ENST00000532185 920 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 HMGB1P33-201ENST00000563485 527 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC002545.1-201ENST00000592511 181 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC008749.1-201ENST00000597650 306 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC012507.3-201ENST00000603556 477 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 APOOP1-201ENST00000604695 592 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC016727.1-205ENST00000605437 569 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC092794.1-201ENST00000612734 582 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC007785.2-201ENST00000598627 1916 ntBASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
RSPO3Q9BXY4 AC103710.2-202ENST00000641454 2853 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC080128.1-201ENST00000474389 1917 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 HSPA8P4-201ENST00000511877 1920 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 MTND5P17-201ENST00000418405 1603 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 Y_RNA.38-201ENST00000362617 102 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RNU6-1167P-201ENST00000363227 94 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 Y_RNA.256-201ENST00000364594 104 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RNU4-48P-201ENST00000365559 182 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RNU6-1029P-201ENST00000384109 107 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RNU6-908P-201ENST00000410160 94 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RNU2-33P-201ENST00000410344 192 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 UBE2V1P8-201ENST00000437166 265 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RPL7P54-201ENST00000438336 674 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC016691.1-201ENST00000441321 413 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC007677.1-201ENST00000445757 515 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RPL7P12-201ENST00000446719 750 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 MTATP6P7-201ENST00000453315 681 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 CECR9-201ENST00000453421 199 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RNU6-261P-201ENST00000459506 102 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 Y_RNA.673-201ENST00000516306 88 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RNU7-193P-201ENST00000516723 65 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 RNU6-928P-201ENST00000516876 104 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AP005902.1-201ENST00000521358 186 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AP003034.1-201ENST00000534621 422 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AL512360.1-201ENST00000555346 234 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC068135.2-201ENST00000569293 1028 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 BNIP3P30-201ENST00000601184 574 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC008536.2-201ENST00000607284 349 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 MIR15A-201ENST00000607334 83 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC022893.3-201ENST00000607665 437 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC093788.1-201ENST00000609356 927 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC012409.4-201ENST00000612923 249 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AP001486.3-201ENST00000615334 372 ntBASIC1.78□□□□□ -2.12
RSPO3Q9BXY4 AC007014.2-201ENST00000615581 479 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms