Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RN7SL327P-201ENST00000488659 223 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 MLLT10P2-201ENST00000506434 249 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 RNU1-61P-201ENST00000516107 151 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC3.54□□□□□ -1.84
SALL3Q9BXA9 SUB1P3-201ENST00000564581 315 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AC007336.1-201ENST00000576365 3828 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AC113195.1-201ENST00000579952 141 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AC073539.2-201ENST00000597113 165 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AL355598.1-201ENST00000604169 202 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SALL3Q9BXA9 RN7SL853P-201ENST00000617250 223 ntBASIC3.54□□□□□ -1.84
SALL3Q9BXA9 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SALL3Q9BXA9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SALL3Q9BXA9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
SALL3Q9BXA9 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AL157777.2-201ENST00000258070 137 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.188-201ENST00000363952 111 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 RNU6-266P-201ENST00000364225 107 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 RNU6-1329P-201ENST00000365664 107 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 RNU6-1074P-201ENST00000383995 104 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 Y_RNA.645-201ENST00000391229 102 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 MIR1289-1-201ENST00000408836 144 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 SSXP9-201ENST00000417503 292 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 ARF4P2-201ENST00000430209 526 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 HMGB1P27-201ENST00000431429 603 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AC011816.1-201ENST00000441346 546 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 GSTA11P-201ENST00000452866 669 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AC022493.2-201ENST00000506122 481 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AC009901.1-201ENST00000506703 541 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 MIR15A-201ENST00000607334 83 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AC090115.4-201ENST00000609970 188 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 AC034102.8-201ENST00000615146 484 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.53□□□□□ -1.84
SALL3Q9BXA9 MTND5P27-201ENST00000428871 1720 ntBASIC3.53□□□□□ -1.84
SALL3Q9BXA9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC005183.1-201ENST00000603687 1979 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.153-201ENST00000363615 91 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.380-201ENST00000365663 111 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 RNU6-505P-201ENST00000384427 107 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.534-201ENST00000384599 112 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC243428.1-201ENST00000421099 264 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC009969.1-201ENST00000438726 172 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 U8.20-201ENST00000459445 131 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC087588.1-201ENST00000462203 316 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC068781.1-201ENST00000488231 618 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 RN7SL283P-201ENST00000489055 303 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 RNA5SP384-201ENST00000516615 116 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC025423.5-201ENST00000550230 219 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 MYL12BP1-201ENST00000569826 507 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 AC107294.3-201ENST00000609211 526 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.52□□□□□ -1.85
SALL3Q9BXA9 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
SALL3Q9BXA9 SDAD1P2-201ENST00000441308 2028 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.2-201ENST00000362330 96 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 RNU6-288P-201ENST00000363690 104 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 SET-203ENST00000372688 801 ntTSL 2 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.473-201ENST00000384333 102 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 Y_RNA.476-201ENST00000384347 108 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 MIR591-201ENST00000385290 95 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 RNU6-1109P-201ENST00000391187 107 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 UBA52P6-201ENST00000399822 382 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 RNU2-23P-201ENST00000410545 195 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 RNU6-607P-201ENST00000411283 108 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 RPL21P90-201ENST00000415692 466 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 SETP5-201ENST00000437270 562 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 SSXP4-201ENST00000451349 245 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 HMGB1P30-201ENST00000492455 606 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 RNU6-927P-201ENST00000516199 100 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 SCARNA16.2-201ENST00000516520 172 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 RNU6-914P-201ENST00000516749 109 ntBASIC3.51□□□□□ -1.85
SALL3Q9BXA9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.51□□□□□ -1.85
SALL3Q9BXA9 AC092447.9-201ENST00000603395 144 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms