Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 AC009318.2-201ENST00000610917 651 ntBASIC3.43□□□□□ -1.86
NDC1Q9BTX1 AC091953.5-201ENST00000622919 233 ntBASIC3.43□□□□□ -1.86
NDC1Q9BTX1 AP003355.3-201ENST00000623465 114 ntBASIC3.43□□□□□ -1.86
NDC1Q9BTX1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NDC1Q9BTX1 AL133383.2-201ENST00000622958 2336 ntBASIC3.43□□□□□ -1.86
NDC1Q9BTX1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC007656.2-201ENST00000624902 4547 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 Y_RNA.26-201ENST00000362539 101 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 RNU6-78P-201ENST00000362897 107 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 Y_RNA.288-201ENST00000364854 92 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 RNU6-806P-201ENST00000365147 105 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 Z98749.2-208ENST00000381646 500 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 Y_RNA.526-201ENST00000384572 110 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 SNORA1.3-201ENST00000384676 136 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 MIR3074-201ENST00000384885 81 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 RPS4XP3-201ENST00000398541 413 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 NDUFS5P4-201ENST00000412983 318 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 CYCSP35-201ENST00000451978 304 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 RPS29P27-201ENST00000463711 170 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 RN7SL293P-201ENST00000481765 281 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC074250.1-201ENST00000511117 192 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 SNORA25.11-201ENST00000515935 105 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 RNU6-397P-201ENST00000516226 104 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 RNU6-928P-201ENST00000516876 104 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 SNORA70.24-201ENST00000517233 118 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 IGKV2-23-201ENST00000518729 323 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AP004607.1-201ENST00000524456 203 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 SYF2P1-201ENST00000550658 413 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC090517.1-201ENST00000569307 266 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC006077.1-201ENST00000604746 343 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC008962.1-201ENST00000605729 304 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AL159153.1-201ENST00000619688 317 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDC1Q9BTX1 AC233263.6-201ENST00000631132 1963 ntBASIC3.42□□□□□ -1.86
NDC1Q9BTX1 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 Y_RNA.64-201ENST00000362845 102 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 RNA5SP50-201ENST00000363731 107 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 RNU4-50P-201ENST00000364361 141 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 RNU6-898P-201ENST00000365627 104 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 Y_RNA.447-201ENST00000384184 113 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 Y_RNA.461-201ENST00000384263 103 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 MIR491-201ENST00000384877 84 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 MT-TW-201ENST00000387382 68 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 MTHFD2P2-201ENST00000407725 247 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 MTCO3P19-201ENST00000415864 321 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 Z98949.2-201ENST00000440996 144 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AC124916.1-201ENST00000444020 547 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 FCF1P4-201ENST00000448326 183 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AC079354.2-201ENST00000453523 154 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 RPL30P10-201ENST00000488148 337 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AC006445.2-201ENST00000510061 472 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 RNU2-53P-201ENST00000516257 147 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AC005357.1-201ENST00000588399 301 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 RPS29P30-201ENST00000600975 111 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 AC006557.5-201ENST00000603126 811 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 U6.105-201ENST00000637379 88 ntBASIC3.41□□□□□ -1.86
NDC1Q9BTX1 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
NDC1Q9BTX1 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.86
NDC1Q9BTX1 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.4□□□□□ -1.86
NDC1Q9BTX1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
NDC1Q9BTX1 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
NDC1Q9BTX1 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.4□□□□□ -1.86
NDC1Q9BTX1 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 RNU6-227P-201ENST00000362865 103 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 RNU6-770P-201ENST00000363929 105 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 RNU6-336P-201ENST00000364891 107 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.4□□□□□ -1.87
NDC1Q9BTX1 SNORA9-201ENST00000384215 133 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 Y_RNA.489-201ENST00000384410 101 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 MIR628-201ENST00000385229 95 ntBASIC3.4□□□□□ -1.87
NDC1Q9BTX1 RPS29P13-201ENST00000402041 169 ntBASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms