Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 RNU1-115P-201ENST00000365329 160 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 Y_RNA.389-201ENST00000383924 113 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 RNU6-95P-201ENST00000384697 107 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 MIR591-201ENST00000385290 95 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AL096701.2-201ENST00000416920 238 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AL139281.1-201ENST00000422120 335 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AC098831.1-201ENST00000440661 216 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AC087884.1-201ENST00000469738 328 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 Y_RNA.668-201ENST00000516233 93 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AC109479.2-201ENST00000517842 174 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AP005902.1-201ENST00000521358 186 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 GNAI2P1-201ENST00000541815 315 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 RNU6-85P-201ENST00000605989 107 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 HMGB1P24-202ENST00000615653 685 ntBASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
LRFN3Q9BTN0 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 Y_RNA.428-201ENST00000384078 102 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNU6-1109P-201ENST00000391187 107 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNA5SP306-201ENST00000411087 107 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 Z99755.1-201ENST00000414048 380 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 HLA-N-201ENST00000437516 135 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 HMGN2P13-201ENST00000476476 274 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RPS27AP10-201ENST00000496103 208 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AC022493.2-201ENST00000506122 481 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNU1-41P-201ENST00000516161 162 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNU1-48P-201ENST00000516400 162 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 SCARNA16.2-201ENST00000516520 172 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNA5SP384-201ENST00000516615 116 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNU6-388P-201ENST00000517012 105 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNU6-389P-201ENST00000517048 105 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 SNORD116.3-201ENST00000517176 78 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNU6-711P-201ENST00000517255 106 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AC008011.1-201ENST00000545989 227 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 GTF3AP2-201ENST00000557014 266 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 CYCSP39-201ENST00000565821 309 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AL109918.3-201ENST00000603072 338 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AC092447.9-201ENST00000603395 144 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AC100812.1-201ENST00000607622 580 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AC107871.2-201ENST00000612894 502 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 AL591424.2-201ENST00000617023 128 ntBASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
LRFN3Q9BTN0 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC091812.1-201ENST00000432235 1948 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 Y_RNA.307-201ENST00000365022 117 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 RNU6-1026P-201ENST00000384465 108 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 RNU6-306P-201ENST00000384617 107 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 U3.37-201ENST00000408528 213 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC243428.1-201ENST00000421099 264 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 BPY2DP-201ENST00000422208 265 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 UBE2V1P4-201ENST00000425374 344 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 USP9YP30-201ENST00000430729 455 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AL714022.1-201ENST00000439897 151 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 SNORD5.1-201ENST00000458800 75 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC104564.1-201ENST00000493028 407 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC107222.1-201ENST00000510899 637 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 SNORD59.2-201ENST00000516873 68 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 Y_RNA.721-201ENST00000517207 102 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC026371.1-201ENST00000551867 419 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC005357.1-201ENST00000588399 301 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC011494.1-201ENST00000596454 237 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 AC020914.4-201ENST00000597690 277 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 U2.1-201ENST00000618978 145 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 MIR3199-2-201ENST00000636243 86 ntBASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
LRFN3Q9BTN0 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 SNORD62.1-201ENST00000362541 86 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 RNA5SP197-201ENST00000363357 119 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 RNU6-450P-201ENST00000364654 107 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 Y_RNA.485-201ENST00000384395 102 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 Y_RNA.512-201ENST00000384518 102 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 RNA5SP31-201ENST00000411144 127 ntBASIC3.53□□□□□ -1.84
LRFN3Q9BTN0 PGBD4P6-201ENST00000421501 610 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms