Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 RNU6-83P-201ENST00000384568 112 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 MIR517C-201ENST00000385103 95 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 RN7SKP101-201ENST00000411376 320 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 RPS27AP14-201ENST00000422868 454 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 MTCYBP5-201ENST00000423752 1135 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 CBX3P6-201ENST00000430257 527 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AL603825.1-201ENST00000438481 80 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 GDI2P2-201ENST00000445131 608 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 RPL30P12-201ENST00000474666 353 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 RPL30P1-201ENST00000488676 339 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC112204.1-201ENST00000502591 103 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 MTCYBP40-201ENST00000509390 1135 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC093259.1-201ENST00000509755 300 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 SNORA43.2-201ENST00000516652 128 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC137800.2-201ENST00000574375 120 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 WISP1-OT1-201ENST00000602893 642 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC016925.2-201ENST00000605108 242 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 BX248123.2-201ENST00000606318 124 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.1□□□□□ -2.23
UPK3BQ9BT76 AC063943.3-201ENST00000615562 356 ntBASIC1.1□□□□□ -2.23
UPK3BQ9BT76 Y_RNA.97-201ENST00000363094 102 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 MIR620-201ENST00000385232 95 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 RNA5SP213-201ENST00000391031 106 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 Y_RNA.597-201ENST00000410463 100 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 BTF3L4P1-201ENST00000413813 468 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 RPL22P18-201ENST00000417197 377 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AL590556.1-201ENST00000423231 483 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AC118469.1-201ENST00000442943 488 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AC112492.4-201ENST00000456549 352 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 FO393415.2-201ENST00000480085 343 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 WDR78-207ENST00000488333 613 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AC021146.2-201ENST00000504736 556 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 HSPE1P23-201ENST00000509838 286 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 TPT1P8-201ENST00000510120 555 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 RNA5SP337-201ENST00000517007 109 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AC090888.2-201ENST00000559765 1144 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AC078795.2-201ENST00000602835 1252 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AL031281.1-201ENST00000604049 488 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AC010900.2-201ENST00000604508 210 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AL139286.2-201ENST00000606838 396 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 RMST_6.1-201ENST00000611980 203 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AL031667.3-201ENST00000620124 655 ntBASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.09□□□□□ -2.23
UPK3BQ9BT76 AL161722.3-201ENST00000605789 2983 ntBASIC1.09□□□□□ -2.24
UPK3BQ9BT76 MTND4P23-201ENST00000447723 1363 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AP000648.3-201ENST00000623539 4507 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 ZNF680P1-201ENST00000436625 1469 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 ZNF29P-201ENST00000225587 168 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 CBX3P1-201ENST00000325243 554 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 RNU6-457P-201ENST00000363999 107 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 U8.10-201ENST00000384260 133 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 SNORA48.1-201ENST00000390879 135 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 RAP1BP3-201ENST00000407180 549 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC114491.1-201ENST00000416095 246 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC119618.1-201ENST00000434191 222 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 HMGB1P31-201ENST00000437242 427 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 MTND5P2-201ENST00000442927 1142 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AMD1P1-201ENST00000457220 922 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC091951.3-201ENST00000504093 246 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 MTND2P33-201ENST00000506452 1031 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 RNU6-123P-201ENST00000516163 102 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 ZNF519P3-201ENST00000557158 1032 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC103987.3-201ENST00000582071 292 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC012409.4-201ENST00000612923 249 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.08□□□□□ -2.24
UPK3BQ9BT76 AC026585.1-201ENST00000619582 524 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms