Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 AIG1P1-201ENST00000503376 148 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AC009812.2-201ENST00000517657 457 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 HPRT1P3-201ENST00000539521 576 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AC103996.1-201ENST00000555468 102 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 BNIP3P16-201ENST00000589779 534 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AL138963.2-201ENST00000605137 226 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 AL121757.2-201ENST00000611223 313 ntBASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
HERPUD2Q9BSE4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-336P-201ENST00000364891 107 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 SNORA51.4-201ENST00000364993 124 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 Y_RNA.373-201ENST00000365600 103 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-877P-201ENST00000383868 107 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 Y_RNA.453-201ENST00000384223 109 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AL117339.3-201ENST00000418733 162 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AC003685.2-201ENST00000422795 395 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 C8orf59P1-201ENST00000429930 303 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AC236972.1-201ENST00000433225 199 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AC013470.1-201ENST00000453438 462 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AC011352.1-201ENST00000512300 793 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-1069P-201ENST00000516612 133 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AP000763.2-201ENST00000540641 163 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AL670379.2-201ENST00000604983 252 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 AC090517.2-201ENST00000614966 680 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 HMGB1P24-202ENST00000615653 685 ntBASIC3□□□□□ -1.93
HERPUD2Q9BSE4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 RPL9P7-201ENST00000330965 580 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-451P-201ENST00000362921 107 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-1222P-201ENST00000384615 107 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AC008267.5-201ENST00000424928 265 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 RPL35AP12-201ENST00000425362 338 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 USP9YP18-201ENST00000425912 695 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 RPS15AP10-201ENST00000432472 382 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AC003982.1-202ENST00000469928 248 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AC008526.1-201ENST00000509149 338 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AC007536.1-201ENST00000533382 349 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AC022080.3-201ENST00000544433 482 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AL133241.1-201ENST00000556832 487 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 VN1R107P-201ENST00000601784 209 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AL355297.2-201ENST00000604792 129 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AC107871.2-201ENST00000612894 502 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 AC008121.3-201ENST00000618726 433 ntBASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.99□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-1210P-201ENST00000363775 107 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 U3.13-201ENST00000364804 214 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 SNORD115-47-201ENST00000391226 86 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 MIR548F1-201ENST00000408667 84 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 FCF1P9-201ENST00000412546 282 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 SNRPEP10-201ENST00000420249 274 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AL161788.1-201ENST00000441805 169 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC243964.1-201ENST00000441814 261 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 SNRPGP7-201ENST00000469016 106 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 RPS29P26-201ENST00000477483 171 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC083904.1-201ENST00000487828 231 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC025423.5-201ENST00000550230 219 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC138761.3-201ENST00000579993 334 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 MIR4658-201ENST00000584344 65 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC090115.4-201ENST00000609970 188 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.98□□□□□ -1.93
HERPUD2Q9BSE4 AC121333.1-201ENST00000567488 2709 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-1283P-201ENST00000365314 105 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 SNORD73A-201ENST00000386062 65 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 RN7SKP123-201ENST00000410732 291 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 RNU6-373P-201ENST00000411247 98 ntBASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.97□□□□□ -1.93
HERPUD2Q9BSE4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms