Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MTCO3P39-201ENST00000514812 518 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-322P-201ENST00000516010 103 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-927P-201ENST00000516199 100 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 AL390208.1-201ENST00000605885 644 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 AL022345.2-201ENST00000606307 135 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 Z82243.1-201ENST00000609432 473 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 AL021879.1-201ENST00000611756 288 ntBASIC0.59□□□□□ -2.31
CDK5RAP2Q96SN8 RNU6-28P-201ENST00000362378 107 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-216P-201ENST00000363282 104 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-288P-201ENST00000363690 104 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-944P-201ENST00000364023 107 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-1164P-201ENST00000364428 107 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 SUGT1P1-201ENST00000379514 476 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC092427.1-201ENST00000439177 601 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 BTF3P15-201ENST00000455606 336 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 RPL30P1-201ENST00000488676 339 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AL133373.1-201ENST00000497098 94 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 PSMC1P5-201ENST00000512850 177 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-965P-201ENST00000516721 96 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AP003355.1-201ENST00000518956 587 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC036111.3-201ENST00000526389 112 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC004908.3-201ENST00000610248 625 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC092447.10-201ENST00000620607 1652 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 Y_RNA.25-201ENST00000362528 102 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 Y_RNA.99-201ENST00000363138 105 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 MIR515-2-201ENST00000384883 83 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 MIR515-1-201ENST00000384884 83 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC069282.1-201ENST00000411911 526 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC083875.1-201ENST00000419509 405 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AL121578.1-201ENST00000428051 892 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 MTND4LP14-201ENST00000429447 288 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 MTCO3P45-201ENST00000443036 613 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 PRPS1P1-201ENST00000445305 876 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 RPS20P10-201ENST00000451209 253 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 CECR9-201ENST00000453421 199 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC091860.1-201ENST00000505723 432 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 CENPUP1-201ENST00000526649 1202 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 CYP3A52P-201ENST00000563326 91 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AL365434.2-201ENST00000607979 234 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 AC130454.1-201ENST00000622948 401 ntBASIC0.58□□□□□ -2.32
CDK5RAP2Q96SN8 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 SNORD56.4-201ENST00000363883 71 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 SNORD114-6-201ENST00000364393 72 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 AL161935.2-201ENST00000414627 60 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 RAC1P8-201ENST00000427086 527 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 GTF2IP3-201ENST00000433887 494 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 CYP4A27P-201ENST00000567218 190 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 VN1R83P-201ENST00000595685 445 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 AC112220.3-201ENST00000605502 502 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 AC073544.1-201ENST00000600110 1595 ntBASIC0.57□□□□□ -2.32
CDK5RAP2Q96SN8 SNORD115-48-201ENST00000364764 76 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 SNORA48.1-201ENST00000390879 135 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 RPL21P24-201ENST00000413752 448 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 MTND5P13-201ENST00000513046 1079 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-1183P-201ENST00000517054 60 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 AC018630.3-201ENST00000542637 96 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 AL512310.8-201ENST00000550183 120 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 MIR4666A-201ENST00000580160 79 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 Y_RNA.433-201ENST00000384089 102 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 MTND4P6-201ENST00000438297 472 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 AC079776.3-201ENST00000450665 370 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 RPL30P6-201ENST00000475925 342 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 RNU2-53P-201ENST00000516257 147 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 RNU11-2P-201ENST00000516898 142 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 MIR3169-201ENST00000578032 83 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 AC023932.2-201ENST00000603176 175 ntBASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
CDK5RAP2Q96SN8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 RNU6-112P-201ENST00000363599 104 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 MIR217-201ENST00000384817 110 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 SNORD65C-201ENST00000390962 71 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 AL117342.1-201ENST00000404861 406 ntBASIC0.55□□□□□ -2.32
CDK5RAP2Q96SN8 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms