Protein–RNA interactions for Protein: Q96S90

LYSMD1, LysM and putative peptidoglycan-binding domain-containing protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1Q96S90 MTATP6P3-201ENST00000581686 676 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC112220.3-201ENST00000605502 502 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC078880.5-201ENST00000617845 421 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AL136313.1-201ENST00000624804 202 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC068205.3-201ENST00000636385 468 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 AC100821.1-201ENST00000523153 2479 ntBASIC0.78□□□□□ -2.28
LYSMD1Q96S90 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 RNU6-207P-201ENST00000384137 107 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 RNU6-296P-201ENST00000384608 107 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 MIR301A-201ENST00000385261 86 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 MRPL35P1-201ENST00000404272 572 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 RSL24D1P8-201ENST00000434442 492 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC130509.1-201ENST00000464158 433 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 RPL9P9-202ENST00000466501 579 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AL356057.1-201ENST00000533798 831 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC137800.2-201ENST00000574375 120 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC018926.1-201ENST00000616335 435 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC123767.1-202ENST00000620407 817 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 MIR8065-201ENST00000620577 100 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.77□□□□□ -2.29
LYSMD1Q96S90 MIR1248-201ENST00000629190 106 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 AC099654.5-201ENST00000636479 350 ntBASIC0.77□□□□□ -2.29
LYSMD1Q96S90 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LYSMD1Q96S90 RNU6-1284P-201ENST00000363701 100 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 RNU6-853P-201ENST00000364306 107 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 Y_RNA.255-201ENST00000364581 97 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 RNU6-468P-201ENST00000384003 109 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 RNU6-166P-201ENST00000384371 107 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 RNU6-1065P-201ENST00000384513 106 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 RNU6-360P-201ENST00000390944 104 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AC069282.1-201ENST00000411911 526 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 MRPS36P1-201ENST00000421291 307 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 MTCO2P1-201ENST00000424648 477 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.76□□□□□ -2.29
LYSMD1Q96S90 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.76□□□□□ -2.29
LYSMD1Q96S90 CBX3P6-201ENST00000430257 527 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.76□□□□□ -2.29
LYSMD1Q96S90 MTND4P25-201ENST00000441039 533 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AC114982.1-201ENST00000469402 321 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 RNA5SP490-201ENST00000517141 136 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AC021451.1-201ENST00000523498 1129 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AL731537.2-201ENST00000561565 951 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AP001542.1-201ENST00000591314 200 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AC083806.3-201ENST00000614016 455 ntBASIC0.76□□□□□ -2.29
LYSMD1Q96S90 AC018630.2-201ENST00000534866 2403 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 DDX43P2-201ENST00000604753 1354 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RNU1-124P-201ENST00000363861 145 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 SNORD114-6-201ENST00000364393 72 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RNU6-968P-201ENST00000384076 107 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RNU6-622P-201ENST00000384272 103 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 MIR19A-201ENST00000384878 82 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RNU6-817P-201ENST00000391083 104 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RNU2-23P-201ENST00000410545 195 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RPL21P111-201ENST00000418453 477 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AL669831.1-202ENST00000428504 417 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.75□□□□□ -2.29
LYSMD1Q96S90 KATNBL1P3-201ENST00000443475 909 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.75□□□□□ -2.29
LYSMD1Q96S90 OR2AQ1P-201ENST00000451972 200 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 snoU13.14-201ENST00000459372 104 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC103851.1-201ENST00000506833 274 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 FABP5P5-201ENST00000515537 406 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 SNORD116-28-201ENST00000516123 91 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 RNU6-334P-201ENST00000517072 102 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AP006587.4-201ENST00000526053 529 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC136932.1-201ENST00000574771 208 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 MIR5094-201ENST00000578766 85 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC0.75□□□□□ -2.29
LYSMD1Q96S90 VN1R87P-201ENST00000596706 487 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 PCMTD1P7-201ENST00000634506 357 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AL512643.1-201ENST00000635735 524 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC068700.1-201ENST00000565862 3754 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 AC027514.1-201ENST00000588561 1603 ntBASIC0.75□□□□□ -2.29
LYSMD1Q96S90 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
LYSMD1Q96S90 Y_RNA.40-201ENST00000362645 93 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 Y_RNA.224-201ENST00000364308 111 ntBASIC0.74□□□□□ -2.29
LYSMD1Q96S90 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms