Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 Y_RNA.527-201ENST00000384573 102 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 MIR218-2-201ENST00000385006 110 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 U3.37-201ENST00000408528 213 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 NDUFS5P4-201ENST00000412983 318 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 BTF3P15-201ENST00000455606 336 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 RPL26P9-201ENST00000457466 433 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC133134.1-201ENST00000466800 359 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC128713.1-201ENST00000471495 306 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC106707.2-201ENST00000484182 374 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC006483.1-201ENST00000487308 313 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 RNU6-377P-201ENST00000515965 102 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC092447.9-201ENST00000603395 144 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 SCARNA4-202ENST00000625402 129 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC119674.1-207ENST00000641355 633 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 CDC27P3-201ENST00000635418 1910 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 Y_RNA.144-201ENST00000363521 113 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNX18Q96RF0 RNU6-1105P-201ENST00000384774 107 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 RNU6-985P-201ENST00000410182 104 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 RNA5SP344-201ENST00000411081 104 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 MTCYBP10-201ENST00000424905 650 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 RPL23AP82-202ENST00000427528 469 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 MTND3P9-201ENST00000429526 346 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 RPL23AP83-201ENST00000434984 473 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AC098831.1-201ENST00000440661 216 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 HIGD1AP2-201ENST00000446367 280 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 snoU13.28-201ENST00000459235 104 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 U8.21-201ENST00000459536 136 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 RPS29P20-201ENST00000489592 171 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 RPS27AP10-201ENST00000496103 208 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AC105758.1-201ENST00000506038 399 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AP005902.1-201ENST00000521358 186 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AC023442.1-201ENST00000531247 422 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 MIR3922-201ENST00000585192 84 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 MIR7851-201ENST00000610611 160 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AC068831.7-201ENST00000616954 363 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AL162373.1-201ENST00000620433 407 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AC093908.1-201ENST00000623125 8092 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 AC073476.4-201ENST00000628409 72 ntBASIC3.12□□□□□ -1.91
SNX18Q96RF0 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SNX18Q96RF0 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.12□□□□□ -1.91
SNX18Q96RF0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.11□□□□□ -1.91
SNX18Q96RF0 AC032011.1-201ENST00000611703 1549 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 SNORD9-201ENST00000362566 104 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 RNU6-78P-201ENST00000362897 107 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 Y_RNA.80-201ENST00000362996 102 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 RNU6-99P-201ENST00000364721 107 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 Y_RNA.314-201ENST00000365114 102 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SNX18Q96RF0 Y_RNA.485-201ENST00000384395 102 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 Y_RNA.533-201ENST00000384596 114 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 MIR34B-201ENST00000385076 84 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SNX18Q96RF0 Y_RNA.605-201ENST00000410577 105 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 AL358176.2-201ENST00000425769 204 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 CYCSP4-201ENST00000429682 331 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 CYCSP35-201ENST00000451978 304 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 AC013470.1-201ENST00000453438 462 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.11□□□□□ -1.91
SNX18Q96RF0 RPL32P34-201ENST00000486380 400 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 RPL17P19-201ENST00000489069 552 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 RNU6-764P-201ENST00000516396 105 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 AC107934.2-201ENST00000518653 310 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 NACAP3-201ENST00000552100 481 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 SUB1P3-201ENST00000564581 315 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.11□□□□□ -1.91
SNX18Q96RF0 AL158827.2-201ENST00000602494 330 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 AL161756.2-201ENST00000604597 246 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 AC007179.3-201ENST00000604976 235 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 HMGB1P24-202ENST00000615653 685 ntBASIC3.11□□□□□ -1.91
SNX18Q96RF0 AL078596.1-201ENST00000624856 447 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms