Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC004584.2-201ENST00000570407 410 ntBASIC-0.24□□□□□ -2.45
CSMD1Q96PZ7 AC010738.1-201ENST00000604970 987 ntBASIC-0.24□□□□□ -2.45
CSMD1Q96PZ7 RNU6-837P-201ENST00000391056 108 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 RNA5SP168-201ENST00000516642 112 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AC090888.1-201ENST00000561335 1141 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 PCNAP1-202ENST00000595299 752 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 SNORD114-24-201ENST00000365029 72 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 MIR218-1-201ENST00000384999 110 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 RNU6-952P-201ENST00000391164 108 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 NCOR1P3-201ENST00000420479 303 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 snoU13.28-201ENST00000459235 104 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 snoU109.2-201ENST00000459316 135 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 BNIP3P31-201ENST00000604515 566 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 SNORD1A-201ENST00000364968 72 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 MIR561-201ENST00000385216 97 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 SNRPEP9-201ENST00000436794 238 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AC022447.1-201ENST00000515358 464 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AC105185.1-201ENST00000518705 535 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 HMSD-204ENST00000526932 162 ntTSL 3 BASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AL360181.4-201ENST00000621752 134 ntBASIC-0.25□□□□□ -2.45
CSMD1Q96PZ7 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 SNORD54-201ENST00000459159 67 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 SNRPGP16-201ENST00000533275 226 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC022432.1-201ENST00000595739 310 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC004009.2-201ENST00000623016 728 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC134026.1-201ENST00000623249 2239 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 RN7SKP88-201ENST00000516847 250 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC022616.8-201ENST00000533569 253 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AL356157.2-201ENST00000605122 111 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 7SK.8-201ENST00000612110 250 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 7SK.11-201ENST00000615477 250 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 7SK.13-201ENST00000622040 250 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC008443.7-201ENST00000622195 246 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 PCMTD1P7-201ENST00000634506 357 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 MIR1295B-201ENST00000636144 60 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 NDUFS5P1-201ENST00000405668 289 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC084024.2-201ENST00000503480 791 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC114981.1-201ENST00000503897 678 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 MRPS36P4-201ENST00000534436 298 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC022523.2-201ENST00000561045 150 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC012669.1-201ENST00000603209 283 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AP000238.1-201ENST00000608759 426 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 FTX_2.1-201ENST00000618816 94 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 AC091965.5-201ENST00000624785 342 ntBASIC-0.26□□□□□ -2.45
CSMD1Q96PZ7 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 MIR103A1-201ENST00000362165 78 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 RNA5SP109-201ENST00000391010 116 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 SCARNA17-201ENST00000516183 144 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC109810.1-201ENST00000534066 224 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AL138963.2-201ENST00000605137 226 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 RN7SL660P-201ENST00000614852 299 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC139769.3-201ENST00000618383 175 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 MIR5739-201ENST00000619803 80 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 U6atac.2-201ENST00000408644 118 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC139712.2-201ENST00000424302 339 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 MTND1P20-201ENST00000430341 950 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 RNU6-420P-201ENST00000458780 107 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 POC1B-211ENST00000549504 581 ntTSL 5 BASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 BPTFP1-201ENST00000579209 492 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 KATNBL1P5-201ENST00000605015 517 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC105129.3-201ENST00000605455 485 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 RNA5SP300-201ENST00000391197 107 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 BX664727.1-201ENST00000416024 466 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC007742.1-201ENST00000425789 329 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 ELOCP26-201ENST00000436067 329 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 MTND1P22-201ENST00000510572 951 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 SNORA31.4-201ENST00000516049 129 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 AC090079.2-201ENST00000575289 768 ntBASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
CSMD1Q96PZ7 MIR302D-201ENST00000362275 68 ntBASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 Y_RNA.452-201ENST00000384202 108 ntBASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 AC023157.2-201ENST00000540596 141 ntBASIC-0.28□□□□□ -2.45
CSMD1Q96PZ7 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.28□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 176.7 ms