Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC093788.1-201ENST00000609356 927 ntBASIC1.67□□□□□ -2.14
COL21A1Q96P44 AL627230.6-201ENST00000611129 280 ntBASIC1.67□□□□□ -2.14
COL21A1Q96P44 AC004223.4-201ENST00000612426 332 ntBASIC1.67□□□□□ -2.14
COL21A1Q96P44 AC104010.1-201ENST00000616889 150 ntBASIC1.67□□□□□ -2.14
COL21A1Q96P44 AC079248.2-201ENST00000623779 326 ntBASIC1.67□□□□□ -2.14
COL21A1Q96P44 AC092192.1-201ENST00000633154 1018 ntBASIC1.67□□□□□ -2.14
COL21A1Q96P44 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.67□□□□□ -2.14
COL21A1Q96P44 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COL21A1Q96P44 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 RNU6-942P-201ENST00000363002 107 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 RNU4-1-201ENST00000363925 141 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 RNY1P12-201ENST00000364251 105 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 SNORD14B-201ENST00000364533 90 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 SNORD48-201ENST00000364953 64 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL21A1Q96P44 SNORA75B-201ENST00000384053 137 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 RNU6-622P-201ENST00000384272 103 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 MIR29C-201ENST00000385231 88 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 RNA5SP213-201ENST00000391031 106 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 AL133475.1-201ENST00000404414 305 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 RNU2-39P-201ENST00000410604 198 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 CALM2P2-201ENST00000428512 440 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 AL445567.1-201ENST00000439121 144 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 snoU13.14-201ENST00000459372 104 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 MRPS17P9-201ENST00000511924 393 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 AC112206.3-201ENST00000514578 389 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 RNU2-53P-201ENST00000516257 147 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 RNU6-232P-201ENST00000517144 64 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 RN7SKP256-201ENST00000517201 314 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 MIR5697-201ENST00000578045 78 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.66□□□□□ -2.14
COL21A1Q96P44 MIR3618-201ENST00000580330 88 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 AC010928.2-201ENST00000588017 287 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 CLIC4P2-201ENST00000601934 717 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 AC022079.1-201ENST00000621546 602 ntBASIC1.66□□□□□ -2.14
COL21A1Q96P44 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL21A1Q96P44 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
COL21A1Q96P44 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL21A1Q96P44 RNU1-17P-201ENST00000363022 152 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 RNU6-553P-201ENST00000364047 96 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 MIR499A-201ENST00000384903 122 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 MIR9-3-201ENST00000385084 90 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 FGF7P8-201ENST00000402994 292 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 MIR1294-201ENST00000408503 142 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 RNU2-23P-201ENST00000410545 195 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 UBE2V1P10-201ENST00000414685 269 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 MTND2P18-201ENST00000419962 1030 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 ELOCP4-201ENST00000420090 333 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 Z99497.1-201ENST00000421282 135 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 AL365203.2-201ENST00000423444 196 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 MTND4P20-201ENST00000424125 869 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.65□□□□□ -2.15
COL21A1Q96P44 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.65□□□□□ -2.15
COL21A1Q96P44 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.65□□□□□ -2.15
COL21A1Q96P44 AC245102.2-201ENST00000448956 180 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 AL137159.1-201ENST00000452808 512 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 BZW1P2-201ENST00000473537 826 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 AC104564.1-201ENST00000493028 407 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 RPS29P11-201ENST00000496507 171 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 RPL23AP63-201ENST00000498752 471 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 AC005178.1-201ENST00000508392 440 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 AC108078.2-201ENST00000510750 236 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.65□□□□□ -2.15
COL21A1Q96P44 AC091965.2-201ENST00000512324 613 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
COL21A1Q96P44 MIR4287-201ENST00000579398 78 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.65□□□□□ -2.15
COL21A1Q96P44 AC011494.1-201ENST00000596454 237 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 AC105129.3-201ENST00000605455 485 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 MIR6845-201ENST00000613182 61 ntBASIC1.65□□□□□ -2.15
COL21A1Q96P44 RNU6-655P-201ENST00000362858 107 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 RNU6-1210P-201ENST00000363775 107 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 Y_RNA.560-201ENST00000384689 102 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 MIR10A-201ENST00000385043 110 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 AC008267.5-201ENST00000424928 265 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.64□□□□□ -2.15
COL21A1Q96P44 USP9YP18-201ENST00000425912 695 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 MTND2P29-201ENST00000438595 412 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 AL353689.1-201ENST00000438895 199 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 USP9YP12-201ENST00000450481 570 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 ZNF114P1-201ENST00000453500 292 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 RPL30P6-201ENST00000475925 342 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 AC018868.1-201ENST00000491307 315 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC1.64□□□□□ -2.15
COL21A1Q96P44 MTND1P22-201ENST00000510572 951 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 SNORA4.4-201ENST00000515921 135 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 Y_RNA.672-201ENST00000516289 104 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 AC107953.1-201ENST00000522216 297 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 MTND2P38-201ENST00000522536 667 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 AC007834.2-201ENST00000536310 343 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 OSBPL9P5-201ENST00000542581 171 ntBASIC1.64□□□□□ -2.15
COL21A1Q96P44 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms