Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AC026464.5-201ENST00000562497 722 ntBASIC3.14□□□□□ -1.91
CCDC138Q96M89 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.14□□□□□ -1.91
CCDC138Q96M89 MIR3124-201ENST00000582636 67 ntBASIC3.14□□□□□ -1.91
CCDC138Q96M89 AC022306.2-201ENST00000617563 647 ntBASIC3.14□□□□□ -1.91
CCDC138Q96M89 AC091903.1-201ENST00000624322 454 ntBASIC3.14□□□□□ -1.91
CCDC138Q96M89 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC138Q96M89 AC241585.2-209ENST00000638217 143 ntBASIC3.14□□□□□ -1.91
CCDC138Q96M89 AC080128.1-201ENST00000474389 1917 ntBASIC3.14□□□□□ -1.91
CCDC138Q96M89 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CCDC138Q96M89 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.14□□□□□ -1.91
CCDC138Q96M89 AC093831.2-201ENST00000624393 3427 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 MTND4P23-201ENST00000447723 1363 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC138Q96M89 RPL9P7-201ENST00000330965 580 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCDC138Q96M89 OR56A5-201ENST00000340110 738 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 MIR34B-201ENST00000385076 84 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 RNU6-1140P-201ENST00000410517 106 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 RNU2-23P-201ENST00000410545 195 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 RNA5SP120-201ENST00000410900 112 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 AC098614.3-201ENST00000438957 440 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 RPL9P9-202ENST00000466501 579 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 RPL30P12-201ENST00000474666 353 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 AC096576.1-201ENST00000489014 359 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 MTCO1P29-201ENST00000496868 288 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 SNORA25.11-201ENST00000515935 105 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 RNU6-1088P-201ENST00000516850 104 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 RNU6-56P-201ENST00000516986 93 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC138Q96M89 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC138Q96M89 SCOCP1-201ENST00000554676 349 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 MIR2682-201ENST00000580305 110 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 MIR3199-1-201ENST00000582434 88 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 MIR3616-201ENST00000584070 92 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC138Q96M89 AC007179.3-201ENST00000604976 235 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 AL591516.1-201ENST00000611326 274 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 MIR7112-201ENST00000616126 65 ntBASIC3.13□□□□□ -1.91
CCDC138Q96M89 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
CCDC138Q96M89 RNA5SP72-201ENST00000364442 117 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 RNU6-1180P-201ENST00000364935 107 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 RNU1-140P-201ENST00000365040 165 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 SET-203ENST00000372688 801 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC138Q96M89 RNU6-1222P-201ENST00000384615 107 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 MIR218-1-201ENST00000384999 110 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 U3.19-201ENST00000390893 196 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 AL357075.1-201ENST00000404107 726 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 AL030996.1-201ENST00000411430 235 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 RPL39P29-201ENST00000447779 157 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC138Q96M89 U8.21-201ENST00000459536 136 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 RN7SL75P-201ENST00000461926 281 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC138Q96M89 SMURF2P1-201ENST00000514992 481 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 RNU6-566P-201ENST00000516790 107 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 RNA5SP454-201ENST00000517231 127 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 AC009812.2-201ENST00000517657 457 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC138Q96M89 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC138Q96M89 AC138761.3-201ENST00000579993 334 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 MIR548S-201ENST00000581352 82 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 AC073410.2-201ENST00000603240 332 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 AL356157.2-201ENST00000605122 111 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 uc_338.15-201ENST00000615470 191 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 SCARNA15.3-201ENST00000626315 122 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 SCARNA4.1-201ENST00000628597 123 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC138Q96M89 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC138Q96M89 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC138Q96M89 AC108206.1-201ENST00000570186 4159 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CCDC138Q96M89 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC138Q96M89 MTND4P27-201ENST00000450813 1354 ntBASIC3.12□□□□□ -1.91
CCDC138Q96M89 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC138Q96M89 SNORA72.1-201ENST00000363485 129 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 U3.6-201ENST00000363622 211 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC138Q96M89 SNORA9-201ENST00000384215 133 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 RNU6-692P-201ENST00000384496 107 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 RNU6-95P-201ENST00000384697 107 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 NDUFB4P4-201ENST00000404822 243 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 U6atac.2-201ENST00000408644 118 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC138Q96M89 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC138Q96M89 UBBP3-201ENST00000445497 241 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC138Q96M89 AC023141.11-201ENST00000508864 202 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 RNU7-30P-201ENST00000516835 62 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 SCARNA20.6-201ENST00000517251 106 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC138Q96M89 AC005668.1-201ENST00000571142 476 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 MIR3117-201ENST00000584034 78 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 uc_338.25-201ENST00000613756 156 ntBASIC3.11□□□□□ -1.91
CCDC138Q96M89 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC138Q96M89 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
CCDC138Q96M89 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC138Q96M89 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
CCDC138Q96M89 RNU6-529P-201ENST00000363383 104 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms