Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNORA71.1-201ENST00000364523 117 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 RNU6-748P-201ENST00000384648 107 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 RNU6-1245P-201ENST00000411130 106 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AL358075.3-201ENST00000426289 226 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AC107399.1-201ENST00000451226 265 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 RNU6-1037P-201ENST00000459571 107 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 RN7SL75P-201ENST00000461926 281 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 CR383656.8-201ENST00000549046 145 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AC103996.1-201ENST00000555468 102 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AL133393.1-201ENST00000603277 287 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AL670379.10-201ENST00000604330 253 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AL670379.9-201ENST00000605428 253 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AC064836.2-201ENST00000609491 462 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 AC244517.12-201ENST00000623581 663 ntBASIC3.58□□□□□ -1.84
CHMP4CQ96CF2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 Y_RNA.263-201ENST00000364659 114 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 RNU6-293P-201ENST00000411259 106 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC074085.1-201ENST00000413598 418 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 BMS1P22-201ENST00000414726 313 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 COTL1P1-201ENST00000422309 375 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC244505.4-201ENST00000434905 287 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 SSXP5-201ENST00000443473 287 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AMD1P1-201ENST00000457220 922 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 RPL27AP5-201ENST00000469428 449 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 RPS29P26-201ENST00000477483 171 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 RN7SL20P-201ENST00000488827 297 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC096576.1-201ENST00000489014 359 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 MTCYBP40-201ENST00000509390 1135 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 RN7SKP282-201ENST00000516824 299 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AP005639.2-201ENST00000527592 928 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AL391813.1-201ENST00000603098 260 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC009314.1-201ENST00000603871 304 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC007318.2-201ENST00000620999 243 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC002064.3-201ENST00000623448 346 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC099654.5-201ENST00000636479 350 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 AC093831.2-201ENST00000624393 3427 ntBASIC3.57□□□□□ -1.84
CHMP4CQ96CF2 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 RNU6-428P-201ENST00000362942 107 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 Y_RNA.356-201ENST00000365475 113 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 RNU6-933P-201ENST00000384424 107 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 RNU6-95P-201ENST00000384697 107 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AL360182.1-201ENST00000397433 468 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 MIR548F5-201ENST00000408421 86 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AL590632.1-201ENST00000424289 371 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 SNRPEP8-201ENST00000442866 260 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 MTND1P11-201ENST00000456661 876 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AC105029.1-201ENST00000520250 669 ntBASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CHMP4CQ96CF2 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 AC099654.7-201ENST00000635788 2127 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 MT-TD-201ENST00000387419 68 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 AL645568.3-201ENST00000433683 316 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 OSTCP8-201ENST00000445117 448 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 MTND1P17-201ENST00000448961 204 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 AC013470.1-201ENST00000453438 462 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 RPS27P27-201ENST00000498779 255 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 MRPS36P2-201ENST00000512569 299 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 Y_RNA.691-201ENST00000516611 103 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 LARP7P3-201ENST00000579888 337 ntBASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.55□□□□□ -1.84
CHMP4CQ96CF2 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms