Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 uc_338.34-201ENST00000617467 174 ntBASIC2.78□□□□□ -1.96
SKA1Q96BD8 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SKA1Q96BD8 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
SKA1Q96BD8 RNU4-82P-201ENST00000362443 140 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 RNU6-105P-201ENST00000363909 104 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 RNU6-266P-201ENST00000364225 107 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 RNU1-138P-201ENST00000384093 164 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 CBX3P9-201ENST00000402326 552 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 RNU2-66P-201ENST00000410650 161 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 RNU2-16P-201ENST00000410712 136 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 RNA5SP21-201ENST00000410917 96 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 SNORD56-201ENST00000413522 71 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 ARL5AP4-201ENST00000430731 512 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 AL606489.2-201ENST00000433886 234 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.77□□□□□ -1.97
SKA1Q96BD8 RPL39P29-201ENST00000447779 157 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 RNU7-180P-201ENST00000459240 63 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 AC090525.1-201ENST00000479116 478 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 SNORA25.17-201ENST00000517184 124 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 CYCSP26-201ENST00000534107 320 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC2.77□□□□□ -1.97
SKA1Q96BD8 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.77□□□□□ -1.97
SKA1Q96BD8 AC104073.3-201ENST00000610942 955 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 AL158209.2-201ENST00000619266 216 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 AC090517.3-201ENST00000625170 141 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 AC092593.1-201ENST00000515413 1815 ntBASIC2.77□□□□□ -1.97
SKA1Q96BD8 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.77□□□□□ -1.97
SKA1Q96BD8 AL354685.2-201ENST00000448218 1447 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SKA1Q96BD8 MIR26A1-201ENST00000362205 77 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 RNU6-1322P-201ENST00000364309 107 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 RNU6-1032P-201ENST00000384100 107 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 RNU1-148P-201ENST00000384472 162 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 SNORD37.1-201ENST00000390968 65 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.76□□□□□ -1.97
SKA1Q96BD8 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SKA1Q96BD8 AC010975.2-201ENST00000427781 588 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.76□□□□□ -1.97
SKA1Q96BD8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.76□□□□□ -1.97
SKA1Q96BD8 SNORA40.12-201ENST00000516329 111 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.76□□□□□ -1.97
SKA1Q96BD8 MIR3126-201ENST00000577443 74 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.76□□□□□ -1.97
SKA1Q96BD8 AP001330.5-201ENST00000607176 411 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.76□□□□□ -1.97
SKA1Q96BD8 MIR6863-201ENST00000636112 90 ntBASIC2.76□□□□□ -1.97
SKA1Q96BD8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
SKA1Q96BD8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
SKA1Q96BD8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SKA1Q96BD8 RNU6-1222P-201ENST00000384615 107 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 Y_RNA.559-201ENST00000384686 107 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 MIR544A-201ENST00000384855 91 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2.75□□□□□ -1.97
SKA1Q96BD8 USP9YP14-201ENST00000430663 563 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.75□□□□□ -1.97
SKA1Q96BD8 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.75□□□□□ -1.97
SKA1Q96BD8 AC011753.1-201ENST00000451001 220 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 AC107401.1-201ENST00000503426 685 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 MTND2P33-201ENST00000506452 1031 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 AC105313.1-201ENST00000509121 353 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 HMGB3P3-201ENST00000510526 400 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.75□□□□□ -1.97
SKA1Q96BD8 AC022880.1-201ENST00000534017 973 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 AC091135.1-201ENST00000585943 307 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 AC025165.5-201ENST00000602802 578 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 AC097372.5-201ENST00000623665 376 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 OR5AK4P-201ENST00000635912 903 ntBASIC2.75□□□□□ -1.97
SKA1Q96BD8 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.75□□□□□ -1.97
SKA1Q96BD8 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SKA1Q96BD8 Y_RNA.40-201ENST00000362645 93 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 SNORA3A-201ENST00000364113 130 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 MIR29B2-201ENST00000385055 81 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 RNU2-52P-201ENST00000410680 190 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 RNA5SP270-201ENST00000411361 118 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.74□□□□□ -1.97
SKA1Q96BD8 AIMP1P2-201ENST00000425294 312 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 VN1R108P-201ENST00000431580 830 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 IFNA11P-201ENST00000446352 526 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 AC108938.1-201ENST00000451204 136 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 CACYBPP2-201ENST00000453625 678 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 RNU6-261P-201ENST00000459506 102 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 SRRM1P2-201ENST00000464531 1192 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.74□□□□□ -1.97
SKA1Q96BD8 TBCAP3-201ENST00000512475 312 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 AC115990.1-201ENST00000526957 301 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 AC009127.3-201ENST00000570531 403 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.74□□□□□ -1.97
SKA1Q96BD8 AC123912.5-201ENST00000605470 343 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SKA1Q96BD8 AL159153.1-201ENST00000619688 317 ntBASIC2.74□□□□□ -1.97
SKA1Q96BD8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SKA1Q96BD8 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.73□□□□□ -1.97
SKA1Q96BD8 AP006437.1-201ENST00000641440 3685 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 Y_RNA.381-201ENST00000365666 102 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 OR5H15-201ENST00000383696 930 ntBASIC2.73□□□□□ -1.97
SKA1Q96BD8 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.73□□□□□ -1.97
SKA1Q96BD8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.73□□□□□ -1.97
SKA1Q96BD8 RPL7P54-201ENST00000438336 674 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms