Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 RPL32P35-201ENST00000415214 394 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 ATG3P1-201ENST00000419507 911 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 RPS27P26-201ENST00000494583 239 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.43□□□□□ -1.86
HPS3Q969F9 RNU6-1016P-201ENST00000516689 94 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 AC093027.1-201ENST00000546698 429 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.43□□□□□ -1.86
HPS3Q969F9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.43□□□□□ -1.86
HPS3Q969F9 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.43□□□□□ -1.86
HPS3Q969F9 AC091152.3-201ENST00000604227 325 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 AC069234.5-201ENST00000611056 416 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 AL359314.1-201ENST00000616913 261 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 GABRG2-229ENST00000641017 3628 ntBASIC3.43□□□□□ -1.86
HPS3Q969F9 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HPS3Q969F9 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.43□□□□□ -1.86
HPS3Q969F9 Y_RNA.67-201ENST00000362870 100 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 Y_RNA.151-201ENST00000363566 112 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 RNU6-336P-201ENST00000364891 107 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 SNORA54-201ENST00000384281 123 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 RNU6-748P-201ENST00000384648 107 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 MIR517A-201ENST00000385001 87 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 MIR147B-201ENST00000390185 80 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 RPS29P13-201ENST00000402041 169 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS3Q969F9 AC245054.2-201ENST00000415639 319 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS3Q969F9 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.42□□□□□ -1.86
HPS3Q969F9 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS3Q969F9 AC133134.1-201ENST00000466800 359 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 AC109925.1-201ENST00000478069 331 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS3Q969F9 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.42□□□□□ -1.86
HPS3Q969F9 POC1B-211ENST00000549504 581 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS3Q969F9 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS3Q969F9 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS3Q969F9 AC018889.1-201ENST00000605372 397 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.42□□□□□ -1.86
HPS3Q969F9 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HPS3Q969F9 AC091564.4-201ENST00000533934 2194 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 HAUS6P2-201ENST00000433254 2404 ntBASIC3.42□□□□□ -1.86
HPS3Q969F9 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
HPS3Q969F9 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
HPS3Q969F9 RNU4-79P-201ENST00000362764 141 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 Y_RNA.509-201ENST00000384506 99 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS3Q969F9 AC074117.2-201ENST00000417130 397 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 MTCO2P27-201ENST00000420740 428 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS3Q969F9 MTND4P28-201ENST00000426217 387 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AC006028.1-201ENST00000438379 402 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 DAP3P1-201ENST00000441522 278 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS3Q969F9 GZMAP1-201ENST00000503054 631 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AC245166.1-201ENST00000521012 253 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS3Q969F9 MIR5690-201ENST00000583739 73 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 BNIP3P16-201ENST00000589779 534 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AC005046.1-201ENST00000608515 625 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS3Q969F9 PISRT1.1-201ENST00000616930 107 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AC024581.2-201ENST00000619986 252 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC3.41□□□□□ -1.86
HPS3Q969F9 MIR8057-201ENST00000620957 69 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AC007318.2-201ENST00000620999 243 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 AC110079.1-202ENST00000635213 138 ntBASIC3.41□□□□□ -1.86
HPS3Q969F9 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.41□□□□□ -1.86
HPS3Q969F9 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
HPS3Q969F9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.4□□□□□ -1.86
HPS3Q969F9 AC073325.2-201ENST00000339545 159 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 SNORD56.1-201ENST00000362913 68 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 RNA5SP374-201ENST00000362939 125 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 RNU6-1317P-201ENST00000364582 104 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 RNU6-843P-201ENST00000384454 104 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 SNORA46-201ENST00000384762 135 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 SNORA48.2-201ENST00000390926 124 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 RNU6-370P-201ENST00000411008 104 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.4□□□□□ -1.87
HPS3Q969F9 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS3Q969F9 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS3Q969F9 Y_RNA.632-201ENST00000459189 102 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 RN7SL75P-201ENST00000461926 281 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 AC006445.1-201ENST00000491925 405 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.4□□□□□ -1.87
HPS3Q969F9 FRG2DP-202ENST00000566967 323 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 AL391813.1-201ENST00000603098 260 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 AC019159.1-201ENST00000605094 187 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 AL133215.3-201ENST00000609801 448 ntBASIC3.4□□□□□ -1.87
HPS3Q969F9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.4□□□□□ -1.87
HPS3Q969F9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HPS3Q969F9 Y_RNA.58-201ENST00000362807 102 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 Y_RNA.154-201ENST00000363624 102 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 RNY3P1-201ENST00000365085 102 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 RNY3-201ENST00000365484 102 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 Y_RNA.431-201ENST00000384086 102 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 Y_RNA.490-201ENST00000384413 102 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 RNU6-306P-201ENST00000384617 107 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 MIR128-1-201ENST00000384921 82 ntBASIC3.39□□□□□ -1.87
HPS3Q969F9 AL513475.1-201ENST00000406602 315 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms