Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 RPS29P27-201ENST00000463711 170 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 AC133134.1-201ENST00000466800 359 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 RNU1-143P-201ENST00000516296 146 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 Y_RNA.687-201ENST00000516558 91 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 AC103996.1-201ENST00000555468 102 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 MIR5701-3-201ENST00000578890 82 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 MIR4503-201ENST00000582187 83 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 MIR5701-1-201ENST00000585138 82 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 AL158827.2-201ENST00000602494 330 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.77□□□□□ -1.81
ERCC4Q92889 U1.23-201ENST00000610293 146 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 MIR8076-201ENST00000611401 83 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 RNU1-68P-201ENST00000615382 146 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 MIR5701-2-201ENST00000615634 82 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 U1.39-201ENST00000621562 146 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.77□□□□□ -1.81
ERCC4Q92889 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.77□□□□□ -1.81
ERCC4Q92889 AL691447.3-201ENST00000635020 330 ntBASIC3.77□□□□□ -1.81
ERCC4Q92889 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.77□□□□□ -1.81
ERCC4Q92889 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC4Q92889 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC4Q92889 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC4Q92889 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.76□□□□□ -1.81
ERCC4Q92889 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ERCC4Q92889 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
ERCC4Q92889 RNY1P16-201ENST00000363063 111 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 Y_RNA.557-201ENST00000384680 107 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 MIR518D-201ENST00000385014 87 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 MIR23A-201ENST00000385245 73 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.76□□□□□ -1.81
ERCC4Q92889 TOMM20P4-201ENST00000427861 435 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.76□□□□□ -1.81
ERCC4Q92889 U8.21-201ENST00000459536 136 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.76□□□□□ -1.81
ERCC4Q92889 FO393415.2-201ENST00000480085 343 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 RNU6-1183P-201ENST00000517054 60 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 COX6CP5-201ENST00000527162 228 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.76□□□□□ -1.81
ERCC4Q92889 MIR4273-201ENST00000582824 84 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 AL133393.1-201ENST00000603277 287 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 SRGNP1-201ENST00000603392 451 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 AC004852.3-201ENST00000614131 326 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 AC138305.3-201ENST00000624988 240 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ERCC4Q92889 CUL1P1-201ENST00000509510 2425 ntBASIC3.76□□□□□ -1.81
ERCC4Q92889 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
ERCC4Q92889 AC008669.1-201ENST00000565823 2178 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ERCC4Q92889 Y_RNA.48-201ENST00000362710 103 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 SNORD56.3-201ENST00000363507 71 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 RNU6-574P-201ENST00000384265 107 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 RNA5SP171-201ENST00000391071 115 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 SAR1AP2-201ENST00000392696 594 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 NUP35P1-201ENST00000422734 947 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 CYCSP4-201ENST00000429682 331 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.75□□□□□ -1.81
ERCC4Q92889 CHEK2P4-201ENST00000450340 246 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 SNORD105B-201ENST00000458770 79 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 RPL23AP67-201ENST00000465341 474 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 MTATP8P1-201ENST00000467115 207 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 AC105758.1-201ENST00000506038 399 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 Y_RNA.721-201ENST00000517207 102 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 AP005902.1-201ENST00000521358 186 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
ERCC4Q92889 H3F3AP1-201ENST00000559984 334 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.75□□□□□ -1.81
ERCC4Q92889 AL355598.1-201ENST00000604169 202 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 AC010205.1-201ENST00000616668 449 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 AC002076.2-201ENST00000617362 122 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 SCARNA4-202ENST00000625402 129 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 MIR4272-201ENST00000635924 64 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
ERCC4Q92889 AC091812.1-201ENST00000432235 1948 ntBASIC3.75□□□□□ -1.81
ERCC4Q92889 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.75□□□□□ -1.81
ERCC4Q92889 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
ERCC4Q92889 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.74□□□□□ -1.81
ERCC4Q92889 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.74□□□□□ -1.81
ERCC4Q92889 AC093010.3-201ENST00000570269 15214 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ERCC4Q92889 Y_RNA.39-201ENST00000362620 98 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 RNA5SP119-201ENST00000362715 117 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 RNU6-78P-201ENST00000362897 107 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 RNU6-428P-201ENST00000362942 107 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 RNU6-595P-201ENST00000363944 107 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 RNU6-99P-201ENST00000364721 107 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 Y_RNA.452-201ENST00000384202 108 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 Y_RNA.485-201ENST00000384395 102 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 Y_RNA.533-201ENST00000384596 114 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.74□□□□□ -1.81
ERCC4Q92889 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
ERCC4Q92889 RNU6-1156P-201ENST00000410365 100 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 RPL26P27-201ENST00000414397 437 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 TMEM167AP1-201ENST00000423409 219 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.74□□□□□ -1.81
ERCC4Q92889 AC091286.1-201ENST00000431233 461 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 AL353997.1-201ENST00000432936 108 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 AC009969.1-201ENST00000438726 172 ntBASIC3.74□□□□□ -1.81
ERCC4Q92889 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 166.6 ms