Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 CYCSP35-201ENST00000451978 304 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 RBMY2UP-201ENST00000453474 324 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 RPS29P27-201ENST00000463711 170 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AC025518.1-201ENST00000479856 347 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 RNU6-120P-201ENST00000516077 103 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 SNORD59.2-201ENST00000516873 68 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AP005902.1-201ENST00000521358 186 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AL162730.1-201ENST00000605734 292 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AL138880.2-201ENST00000616214 239 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 AC090617.7-201ENST00000623952 126 ntBASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCHCR1Q8TD31 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
CCHCR1Q8TD31 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
CCHCR1Q8TD31 AL356274.2-201ENST00000624379 3752 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 Y_RNA.145-201ENST00000363527 102 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC117470.1-201ENST00000381974 330 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 MIR7-3-201ENST00000384898 110 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC008267.5-201ENST00000424928 265 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 CST9LP2-201ENST00000437612 320 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC006026.2-201ENST00000457376 180 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 RPL26P9-201ENST00000457466 433 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC128713.1-201ENST00000471495 306 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC068781.1-201ENST00000488231 618 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 RPS29P20-201ENST00000489592 171 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC022447.4-201ENST00000504053 364 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 FCF1P8-201ENST00000510322 597 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 MIR3922-201ENST00000585192 84 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AL451007.1-201ENST00000595491 289 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 AC019176.2-201ENST00000611579 315 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 MIR6075-201ENST00000620782 95 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCHCR1Q8TD31 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC110491.1-201ENST00000562191 2010 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RNU4-35P-201ENST00000362588 141 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RNA5SP119-201ENST00000362715 117 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RNU6-105P-201ENST00000363909 104 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RNY1P14-201ENST00000384426 108 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RN7SKP58-201ENST00000411010 305 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC096664.2-201ENST00000411843 406 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 BMS1P22-201ENST00000414726 313 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RPL32P35-201ENST00000415214 394 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 EIF4EP2-201ENST00000422816 654 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 HMGN2P10-201ENST00000448085 265 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RPL30P14-201ENST00000482744 348 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC114801.2-201ENST00000503825 781 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RNA5SP217-201ENST00000515959 91 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RNU6-612P-201ENST00000516909 102 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 RNU6-264P-201ENST00000517134 104 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 MIR4273-201ENST00000582824 84 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC004832.5-201ENST00000608677 401 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC083806.3-201ENST00000614016 455 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC068831.7-201ENST00000616954 363 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 AC073308.1-201ENST00000623696 305 ntBASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.45□□□□□ -1.86
CCHCR1Q8TD31 FAM35CP-201ENST00000554755 2470 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 RNU1-100P-201ENST00000365255 165 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 RNU1-115P-201ENST00000365329 160 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 SNORD17-201ENST00000390930 237 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 AL714022.1-201ENST00000439897 151 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 FO393415.2-201ENST00000480085 343 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 RN7SL293P-201ENST00000481765 281 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 RPL17P19-201ENST00000489069 552 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 AP000889.1-201ENST00000530968 660 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 CBX3P8-201ENST00000532412 525 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 MIR5696-201ENST00000578474 85 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 MIR4444-1-201ENST00000581696 74 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 MIR4444-2-201ENST00000584390 74 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 MTND4LP5-201ENST00000605152 292 ntBASIC3.44□□□□□ -1.86
CCHCR1Q8TD31 AC005014.2-201ENST00000607795 599 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms