Protein–RNA interactions for Protein: Q8NG31

KNL1, Kinetochore scaffold 1, humanhuman

Predictions only

Length 2,342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1Q8NG31 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.03□□□□□ -2.4
KNL1Q8NG31 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.03□□□□□ -2.4
KNL1Q8NG31 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC0.03□□□□□ -2.4
KNL1Q8NG31 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC0.03□□□□□ -2.4
KNL1Q8NG31 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC0.03□□□□□ -2.4
KNL1Q8NG31 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.03□□□□□ -2.4
KNL1Q8NG31 RNA5SP269-201ENST00000459032 137 ntBASIC0.03□□□□□ -2.4
KNL1Q8NG31 HMGN1P13-201ENST00000505795 138 ntBASIC0.03□□□□□ -2.4
KNL1Q8NG31 RN7SKP258-201ENST00000517151 304 ntBASIC0.03□□□□□ -2.4
KNL1Q8NG31 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.03□□□□□ -2.4
KNL1Q8NG31 uc_338.6-201ENST00000613544 171 ntBASIC0.03□□□□□ -2.4
KNL1Q8NG31 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.03□□□□□ -2.4
KNL1Q8NG31 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.03□□□□□ -2.41
KNL1Q8NG31 Y_RNA.572-201ENST00000384757 98 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.03□□□□□ -2.41
KNL1Q8NG31 RNU6-360P-201ENST00000390944 104 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC0.03□□□□□ -2.41
KNL1Q8NG31 AL512844.2-201ENST00000433990 593 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.03□□□□□ -2.41
KNL1Q8NG31 AC244505.3-201ENST00000454598 187 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 AC010631.1-201ENST00000474150 156 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 RPL22P13-201ENST00000493291 347 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 PDCD5P2-201ENST00000507570 312 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 PTP4A1P4-201ENST00000512479 322 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.03□□□□□ -2.41
KNL1Q8NG31 RNU6-165P-201ENST00000517170 99 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 AC073410.2-201ENST00000603240 332 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 AL031176.1-201ENST00000604554 466 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 AC092106.3-201ENST00000611308 722 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 UBE2Q2P6-201ENST00000612666 153 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 AC134026.1-201ENST00000623249 2239 ntBASIC0.03□□□□□ -2.41
KNL1Q8NG31 RNA5SP214-201ENST00000363378 118 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 RNU6-46P-201ENST00000383860 107 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 Y_RNA.453-201ENST00000384223 109 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 MIR224-201ENST00000384889 81 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 RNU2-48P-201ENST00000410694 191 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 AL161935.2-201ENST00000414627 60 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 RPL21P111-201ENST00000418453 477 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 FAM204CP-201ENST00000424489 642 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 AC099677.2-201ENST00000436385 175 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 AC084024.2-201ENST00000503480 791 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 AL590240.4-201ENST00000616908 390 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 RNY4P24-201ENST00000362735 96 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 Y_RNA.132-201ENST00000363421 102 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 RNY3-201ENST00000365484 102 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
KNL1Q8NG31 UBE2V1P8-201ENST00000437166 265 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 LARP1BP2-201ENST00000486594 519 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 AC010587.2-201ENST00000511727 448 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 RNU6-197P-201ENST00000516680 100 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 SCARNA16.5-201ENST00000517114 183 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 AC027104.1-201ENST00000563702 681 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 AP000860.1-201ENST00000605250 559 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC0.02□□□□□ -2.41
KNL1Q8NG31 AL138713.1-201ENST00000624026 2130 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 AL109659.3-201ENST00000624985 950 ntBASIC0.02□□□□□ -2.41
KNL1Q8NG31 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC0.02□□□□□ -2.41
KNL1Q8NG31 Y_RNA.25-201ENST00000362528 102 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 RNU6-452P-201ENST00000384406 107 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 RNU6-233P-201ENST00000410845 141 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AL049874.1-201ENST00000489560 388 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC108740.1-201ENST00000498629 225 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC022483.1-201ENST00000514020 567 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AL121579.1-201ENST00000555129 305 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AL133445.2-201ENST00000611191 527 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 MIR371B-201ENST00000638082 66 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 RNU6-1151P-201ENST00000384684 107 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC0.01□□□□□ -2.41
KNL1Q8NG31 SNX3P1X-201ENST00000414887 175 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 RPL22P18-201ENST00000417197 377 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC109329.1-201ENST00000518744 317 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 C1DP5-201ENST00000525775 383 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC022616.8-201ENST00000533569 253 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC002400.1-201ENST00000569310 726 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC016542.1-201ENST00000608259 493 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC073349.3-201ENST00000617616 186 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC079416.3-201ENST00000624479 549 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 AC100810.6-201ENST00000638068 285 ntBASIC0.01□□□□□ -2.41
KNL1Q8NG31 MIR101-1-201ENST00000362265 75 ntBASIC0□□□□□ -2.41
KNL1Q8NG31 RNU6-112P-201ENST00000363599 104 ntBASIC0□□□□□ -2.41
KNL1Q8NG31 SNORD114-9-201ENST00000364370 72 ntBASIC0□□□□□ -2.41
KNL1Q8NG31 RNU4-9P-201ENST00000364951 139 ntBASIC0□□□□□ -2.41
KNL1Q8NG31 MIR597-201ENST00000384968 97 ntBASIC0□□□□□ -2.41
KNL1Q8NG31 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0□□□□□ -2.41
KNL1Q8NG31 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0□□□□□ -2.41
KNL1Q8NG31 AC069257.2-201ENST00000441819 155 ntBASIC0□□□□□ -2.41
KNL1Q8NG31 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0□□□□□ -2.41
KNL1Q8NG31 Y_RNA.654-201ENST00000497848 106 ntBASIC0□□□□□ -2.41
KNL1Q8NG31 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0□□□□□ -2.41
KNL1Q8NG31 RNA5SP503-201ENST00000517047 117 ntBASIC0□□□□□ -2.41
KNL1Q8NG31 AP003392.2-201ENST00000527269 208 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms