Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 AC005609.4-201ENST00000625071 447 ntBASIC2.51□□□□□ -2.01
CCDC89Q8N998 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC89Q8N998 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 RNU6-944P-201ENST00000364023 107 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 SNORA80E-201ENST00000384744 137 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 SNORA16.2-201ENST00000390991 127 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 AL512604.1-201ENST00000404812 257 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 U3.40-201ENST00000408706 208 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 AL356379.1-201ENST00000414105 126 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 CBX3P6-201ENST00000430257 527 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 RPS15AP10-201ENST00000432472 382 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 MTND1P26-201ENST00000440488 538 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 AC010486.3-201ENST00000511602 785 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 RSL24D1P11-201ENST00000591045 491 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 AC067747.1-201ENST00000608026 250 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 AC091834.1-201ENST00000614543 472 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.5□□□□□ -2.01
CCDC89Q8N998 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC89Q8N998 ZNF702P-202ENST00000434269 1966 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 MIR21-201ENST00000362134 72 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 RNA5SP387-201ENST00000364226 106 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 RNU1-51P-201ENST00000365345 176 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 RNU5A-6P-201ENST00000384136 116 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 MIR196B-201ENST00000384852 84 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 Y_RNA.597-201ENST00000410463 100 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 RNU6-293P-201ENST00000411259 106 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 COTL1P1-201ENST00000422309 375 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AC243964.1-201ENST00000441814 261 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AC025750.2-201ENST00000442609 450 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC89Q8N998 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CCDC89Q8N998 RNA5SP320-201ENST00000516263 124 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 RN7SKP219-201ENST00000516825 296 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AP005435.4-201ENST00000529514 284 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AL137161.1-201ENST00000532231 390 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AL356057.1-201ENST00000533798 831 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 MTCO3P23-201ENST00000561363 289 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AC103987.3-201ENST00000582071 292 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 BNIP3P16-201ENST00000589779 534 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AC026790.2-201ENST00000606282 430 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 SDR42E1P4-201ENST00000620894 481 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 YWHAEP7-203ENST00000622054 312 ntBASIC2.49□□□□□ -2.01
CCDC89Q8N998 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.49□□□□□ -2.01
CCDC89Q8N998 Y_RNA.333-201ENST00000365274 102 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 Y_RNA.399-201ENST00000383955 105 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 SNORA75-201ENST00000384158 137 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 RNU6-517P-201ENST00000384362 110 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 RNY3P9-201ENST00000384727 106 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AL445529.1-201ENST00000398713 389 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 RNA5SP450-201ENST00000411206 102 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AC096664.2-201ENST00000411843 406 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 RPL32P28-201ENST00000443577 397 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.48□□□□□ -2.01
CCDC89Q8N998 PRELID3BP1-201ENST00000457142 540 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AC022447.4-201ENST00000504053 364 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.48□□□□□ -2.01
CCDC89Q8N998 RNU5F-2P-201ENST00000516066 82 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 SNORA25.17-201ENST00000517184 124 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AC069113.1-201ENST00000517763 267 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CCDC89Q8N998 AC073648.5-201ENST00000603502 305 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AP001596.2-201ENST00000608410 312 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 MIR7106-201ENST00000612419 65 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AC063943.3-201ENST00000615562 356 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AL359314.1-201ENST00000616913 261 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AC006386.2-201ENST00000624491 75 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 AC012005.1-201ENST00000624575 75 ntBASIC2.48□□□□□ -2.01
CCDC89Q8N998 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
CCDC89Q8N998 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CCDC89Q8N998 Y_RNA.77-201ENST00000362962 107 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 RNU6-1285P-201ENST00000363480 105 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 Y_RNA.159-201ENST00000363674 87 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 SNORA70.4-201ENST00000365509 134 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 RNU6-903P-201ENST00000391270 109 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 SNORA11-201ENST00000408789 128 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 SRIP3-201ENST00000413200 219 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC89Q8N998 MTATP6P17-201ENST00000431030 672 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC89Q8N998 FDX1P2-201ENST00000450769 375 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC89Q8N998 RNA5SP233-201ENST00000459153 113 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 RN7SKP298-201ENST00000515950 94 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 RNU6-965P-201ENST00000516721 96 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC89Q8N998 PRELID2P1-201ENST00000552837 301 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC89Q8N998 MIR4319-201ENST00000577285 85 ntBASIC2.47□□□□□ -2.01
CCDC89Q8N998 AC008752.3-201ENST00000588113 712 ntBASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms